Nature Communications (Oct 2020)

A strategy to incorporate prior knowledge into correlation network cutoff selection

  • Elisa Benedetti,
  • Maja Pučić-Baković,
  • Toma Keser,
  • Nathalie Gerstner,
  • Mustafa Büyüközkan,
  • Tamara Štambuk,
  • Maurice H. J. Selman,
  • Igor Rudan,
  • Ozren Polašek,
  • Caroline Hayward,
  • Hassen Al-Amin,
  • Karsten Suhre,
  • Gabi Kastenmüller,
  • Gordan Lauc,
  • Jan Krumsiek

DOI
https://doi.org/10.1038/s41467-020-18675-3
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 12

Abstract

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Correlation network inference is typically based on the significance of the correlation coefficients, but this procedure is not guaranteed to capture biological mechanisms. Here, the authors develop a cutoff selection algorithm that maximizes the overlap between inferred networks and prior knowledge.