PLoS Computational Biology (Aug 2015)

Changes in Postural Syntax Characterize Sensory Modulation and Natural Variation of C. elegans Locomotion.

  • Roland F Schwarz,
  • Robyn Branicky,
  • Laura J Grundy,
  • William R Schafer,
  • André E X Brown

DOI
https://doi.org/10.1371/journal.pcbi.1004322
Journal volume & issue
Vol. 11, no. 8
p. e1004322

Abstract

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Locomotion is driven by shape changes coordinated by the nervous system through time; thus, enumerating an animal's complete repertoire of shape transitions would provide a basis for a comprehensive understanding of locomotor behaviour. Here we introduce a discrete representation of behaviour in the nematode C. elegans. At each point in time, the worm's posture is approximated by its closest matching template from a set of 90 postures and locomotion is represented as sequences of postures. The frequency distribution of postural sequences is heavy-tailed with a core of frequent behaviours and a much larger set of rarely used behaviours. Responses to optogenetic and environmental stimuli can be quantified as changes in postural syntax: worms show different preferences for different sequences of postures drawn from the same set of templates. A discrete representation of behaviour will enable the use of methods developed for other kinds of discrete data in bioinformatics and language processing to be harnessed for the study of behaviour.