F1000Research (Oct 2018)

Increasing workflow development speed and reproducibility with Vectools [version 2; referees: 2 approved]

  • Tyler Weirick,
  • Raphael Müller,
  • Shizuka Uchida

DOI
https://doi.org/10.12688/f1000research.16301.2
Journal volume & issue
Vol. 7

Abstract

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Despite advances in bioinformatics, custom scripts remain a source of difficulty, slowing workflow development and hampering reproducibility. Here, we introduce Vectools, a command-line tool-suite to reduce reliance on custom scripts and improve reproducibility by offering a wide range of common easy-to-use functions for table and vector manipulation. Vectools also offers a number of vector related functions to speed up workflow development, such as simple machine learning and common statistics functions.