Nature Communications (Oct 2020)
Genome biology of the paleotetraploid perennial biomass crop Miscanthus
- Therese Mitros,
- Adam M. Session,
- Brandon T. James,
- Guohong Albert Wu,
- Mohammad B. Belaffif,
- Lindsay V. Clark,
- Shengqiang Shu,
- Hongxu Dong,
- Adam Barling,
- Jessica R. Holmes,
- Jessica E. Mattick,
- Jessen V. Bredeson,
- Siyao Liu,
- Kerrie Farrar,
- Katarzyna Głowacka,
- Stanisław Jeżowski,
- Kerrie Barry,
- Won Byoung Chae,
- John A. Juvik,
- Justin Gifford,
- Adebosola Oladeinde,
- Toshihiko Yamada,
- Jane Grimwood,
- Nicholas H. Putnam,
- Jose De Vega,
- Susanne Barth,
- Manfred Klaas,
- Trevor Hodkinson,
- Laigeng Li,
- Xiaoli Jin,
- Junhua Peng,
- Chang Yeon Yu,
- Kweon Heo,
- Ji Hye Yoo,
- Bimal Kumar Ghimire,
- Iain S. Donnison,
- Jeremy Schmutz,
- Matthew E. Hudson,
- Erik J. Sacks,
- Stephen P. Moose,
- Kankshita Swaminathan,
- Daniel S. Rokhsar
Affiliations
- Therese Mitros
- Department of Molecular and Cell Biology, University of California
- Adam M. Session
- Department of Molecular and Cell Biology, University of California
- Brandon T. James
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Guohong Albert Wu
- U.S. Department of Energy Joint Genome Institute
- Mohammad B. Belaffif
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Lindsay V. Clark
- Department of Crop Sciences, University of Illinois
- Shengqiang Shu
- U.S. Department of Energy Joint Genome Institute
- Hongxu Dong
- Department of Crop Sciences, University of Illinois
- Adam Barling
- Department of Crop Sciences, University of Illinois
- Jessica R. Holmes
- Department of Crop Sciences, University of Illinois
- Jessica E. Mattick
- Department of Crop Sciences, University of Illinois
- Jessen V. Bredeson
- Department of Molecular and Cell Biology, University of California
- Siyao Liu
- Department of Crop Sciences, University of Illinois
- Kerrie Farrar
- Institute of Biological, Environmental AND Rural Sciences (IBERS), Aberystwyth University, Gogerddan
- Katarzyna Głowacka
- Institute of Plant Genetics, Polish Academy of Sciences
- Stanisław Jeżowski
- Institute of Plant Genetics, Polish Academy of Sciences
- Kerrie Barry
- U.S. Department of Energy Joint Genome Institute
- Won Byoung Chae
- Department of Crop Sciences, University of Illinois
- John A. Juvik
- Department of Crop Sciences, University of Illinois
- Justin Gifford
- Department of Crop Sciences, University of Illinois
- Adebosola Oladeinde
- Department of Crop Sciences, University of Illinois
- Toshihiko Yamada
- Field Science Center for Northern Biosphere
- Jane Grimwood
- U.S. Department of Energy Joint Genome Institute
- Nicholas H. Putnam
- Dovetail Genomics
- Jose De Vega
- Earlham Institute, Norwich Research Park Innovation Centre
- Susanne Barth
- Teagasc, Crops, Environment and Land Use Programme, Oak Park Research Centre
- Manfred Klaas
- Teagasc, Crops, Environment and Land Use Programme, Oak Park Research Centre
- Trevor Hodkinson
- Botany, School of Natural Sciences, Trinity College Dublin, The University of Dublin
- Laigeng Li
- Institute of Plant Physiology and Ecology, Chinese Academy of Sciences
- Xiaoli Jin
- Department of Agronomy, Zhejiang University
- Junhua Peng
- HuaZhi Rice Biotech Company
- Chang Yeon Yu
- Department of Applied Plant Sciences, Kangwon National University
- Kweon Heo
- Department of Applied Plant Sciences, Kangwon National University
- Ji Hye Yoo
- Department of Applied Plant Sciences, Kangwon National University
- Bimal Kumar Ghimire
- Department of Applied Bioscience, Konkuk University
- Iain S. Donnison
- Institute of Biological, Environmental AND Rural Sciences (IBERS), Aberystwyth University, Gogerddan
- Jeremy Schmutz
- U.S. Department of Energy Joint Genome Institute
- Matthew E. Hudson
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Erik J. Sacks
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Stephen P. Moose
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Kankshita Swaminathan
- DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois
- Daniel S. Rokhsar
- Department of Molecular and Cell Biology, University of California
- DOI
- https://doi.org/10.1038/s41467-020-18923-6
- Journal volume & issue
-
Vol. 11,
no. 1
pp. 1 – 11
Abstract
The perennial grass Miscanthus is a promising biomass crop. Here, via genomics and transcriptomics, the authors reveal its allotetraploid origin, characterize gene expression associated with rhizome development and nutrient recycling, and describe the hybrid origin of the triploid M. x giganteus.
