eLife (Feb 2022)

Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae

  • Aftab Nadeem,
  • Alexandra Berg,
  • Hudson Pace,
  • Athar Alam,
  • Eric Toh,
  • Jörgen Ådén,
  • Nikola Zlatkov,
  • Si Lhyam Myint,
  • Karina Persson,
  • Gerhard Gröbner,
  • Anders Sjöstedt,
  • Marta Bally,
  • Jonas Barandun,
  • Bernt Eric Uhlin,
  • Sun Nyunt Wai

DOI
https://doi.org/10.7554/eLife.73439
Journal volume & issue
Vol. 11

Abstract

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The α-pore-forming toxins (α-PFTs) from pathogenic bacteria damage host cell membranes by pore formation. We demonstrate a remarkable, hitherto unknown mechanism by an α-PFT protein from Vibrio cholerae. As part of the MakA/B/E tripartite toxin, MakA is involved in membrane pore formation similar to other α-PFTs. In contrast, MakA in isolation induces tube-like structures in acidic endosomal compartments of epithelial cells in vitro. The present study unravels the dynamics of tubular growth, which occurs in a pH-, lipid-, and concentration-dependent manner. Within acidified organelle lumens or when incubated with cells in acidic media, MakA forms oligomers and remodels membranes into high-curvature tubes leading to loss of membrane integrity. A 3.7 Å cryo-electron microscopy structure of MakA filaments reveals a unique protein-lipid superstructure. MakA forms a pinecone-like spiral with a central cavity and a thin annular lipid bilayer embedded between the MakA transmembrane helices in its active α-PFT conformation. Our study provides insights into a novel tubulation mechanism of an α-PFT protein and a new mode of action by a secreted bacterial toxin.

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