ImageServer, a Tool for On-line Processing and Analysis of Biological Images

Pisarev Andrei; Poustelnikova Ekaterina; Kozlov Konstantin; Myasnikova Ekaterina; Samsonova Maria; Reinitz John

doi:10.1515/jib-2005-10

Journal of Integrative Bioinformatics (Dec 2005)

ImageServer, a Tool for On-line Processing and Analysis of Biological Images

Pisarev Andrei,
Poustelnikova Ekaterina,
Kozlov Konstantin,
Myasnikova Ekaterina,
Samsonova Maria,
Reinitz John

Affiliations

Pisarev Andrei: Department of Computational Biology, St.Petersburg State Polytechnical University, 195251, St.Petersburg, Russian Federation
Poustelnikova Ekaterina: Department of Computational Biology, St.Petersburg State Polytechnical University, 195251 St.Petersburg, Russian Federation
Kozlov Konstantin: Department of Computational Biology, St.Petersburg State Polytechnical University, 195251 St.Petersburg, Russian Federation
Myasnikova Ekaterina: Department of Computational Biology, St.Petersburg State Polytechnical University, 195251 St.Petersburg, Russian Federation
Samsonova Maria: Department of Computational Biology, St.Petersburg State Polytechnical University, 195251 St.Petersburg, Russian Federation
Reinitz John: Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, New York, 11794-3600 United States of America

DOI: https://doi.org/10.1515/jib-2005-10
Journal volume & issue: Vol. 2, no. 1
pp. 1 – 9

Abstract

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We present a novel tool for processing and analysis of images of gene expression patterns stored in a relational database. This tool, known as ImageServer, is portable across different software/hardware platforms and supports both basic and subject domain oriented operations on images. The tool is used to process and analyze images stored in FlyEx database (http://urchin.spbcas.ru/flyex); software and documentation are available for download from http://urchin.spbcas.ru/downloads/IS/IS.htm.

Published in Journal of Integrative Bioinformatics

ISSN: 1613-4516 (Online)
Publisher: De Gruyter
Country of publisher: Germany
LCC subjects: Technology: Chemical technology: Biotechnology
Website: https://www.degruyter.com/view/j/jib

About the journal