Spiny mice activate unique transcriptional programs after severe kidney injury regenerating organ function without fibrosis
Daryl M. Okamura,
Chris M. Brewer,
Paul Wakenight,
Nadia Bahrami,
Kristina Bernardi,
Amy Tran,
Jill Olson,
Xiaogang Shi,
Szu-Ying Yeh,
Adrian Piliponsky,
Sarah J. Collins,
Elizabeth D. Nguyen,
Andrew E. Timms,
James W. MacDonald,
Theo K. Bammler,
Branden R. Nelson,
Kathleen J. Millen,
David R. Beier,
Mark W. Majesky
Affiliations
Daryl M. Okamura
Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA; Corresponding author
Chris M. Brewer
Department of Laboratory Medicine & Pathology, University of Washington, Seattle, WA 98195, USA; Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Paul Wakenight
Center for Integrated Brain Research, Seattle Children's Research Institute, Seattle, WA 98105, USA
Nadia Bahrami
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Kristina Bernardi
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Amy Tran
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Jill Olson
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Xiaogang Shi
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Szu-Ying Yeh
Center for Integrated Brain Research, Seattle Children's Research Institute, Seattle, WA 98105, USA
Adrian Piliponsky
Center for Immunity & Immunotherapies, Seattle Children's Research Institute, Seattle, WA 98105, USA
Sarah J. Collins
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Elizabeth D. Nguyen
Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Andrew E. Timms
Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
James W. MacDonald
Department of Environmental & Occupational Health, University of Washington, Seattle, WA 98195, USA
Theo K. Bammler
Department of Environmental & Occupational Health, University of Washington, Seattle, WA 98195, USA
Branden R. Nelson
Center for Integrated Brain Research, Seattle Children's Research Institute, Seattle, WA 98105, USA
Kathleen J. Millen
Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Center for Integrated Brain Research, Seattle Children's Research Institute, Seattle, WA 98105, USA
David R. Beier
Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA
Mark W. Majesky
Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Department of Laboratory Medicine & Pathology, University of Washington, Seattle, WA 98195, USA; Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98105, USA; Institute of Stem Cell & Regenerative Medicine, University of Washington, Seattle, WA 98195, USA; Corresponding author
Summary: Fibrosis-driven solid organ failure is an enormous burden on global health. Spiny mice (Acomys) are terrestrial mammals that can regenerate severe skin wounds without scars to avoid predation. Whether spiny mice also regenerate internal organ injuries is unknown. Here, we show that despite equivalent acute obstructive or ischemic kidney injury, spiny mice fully regenerate nephron structure and organ function without fibrosis, whereas C57Bl/6 or CD1 mice progress to complete organ failure with extensive renal fibrosis. Two mechanisms for vertebrate regeneration have been proposed that emphasize either extrinsic (pro-regenerative macrophages) or intrinsic (surviving cells of the organ itself) controls. Comparative transcriptome analysis revealed that the Acomys genome appears poised at the time of injury to initiate regeneration by surviving kidney cells, whereas macrophage accumulation was not detected until about day 7. Thus, we provide evidence for rapid activation of a gene expression signature for regenerative wound healing in the spiny mouse kidney.