PLoS Computational Biology (Jun 2021)

Ten simple rules for making a vocabulary FAIR.

  • Simon J D Cox,
  • Alejandra N Gonzalez-Beltran,
  • Barbara Magagna,
  • Maria-Cristina Marinescu

DOI
https://doi.org/10.1371/journal.pcbi.1009041
Journal volume & issue
Vol. 17, no. 6
p. e1009041

Abstract

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We present ten simple rules that support converting a legacy vocabulary-a list of terms available in a print-based glossary or in a table not accessible using web standards-into a FAIR vocabulary. Various pathways may be followed to publish the FAIR vocabulary, but we emphasise particularly the goal of providing a globally unique resolvable identifier for each term or concept. A standard representation of the concept should be returned when the individual web identifier is resolved, using SKOS or OWL serialised in an RDF-based representation for machine-interchange and in a web-page for human consumption. Guidelines for vocabulary and term metadata are provided, as well as development and maintenance considerations. The rules are arranged as a stepwise recipe for creating a FAIR vocabulary based on the legacy vocabulary. By following these rules you can achieve the outcome of converting a legacy vocabulary into a standalone FAIR vocabulary, which can be used for unambiguous data annotation. In turn, this increases data interoperability and enables data integration.