Indonesian Journal of Chemistry (Aug 2023)

Synthesis and Antidiabetic Evaluation of <i>N</i>’-Benzylidenebenzohydrazide Derivatives by <i>In Silico</i> Studies

  • Yusuf Syaril Alam,
  • Pratiwi Pudjiastuti,
  • Saipul Maulana,
  • Nur Rahmayanti Afifah,
  • Fahimah Martak,
  • Arif Fadlan,
  • Tutik Sri Wahyuni,
  • Syukri Arief

DOI
https://doi.org/10.22146/ijc.82073
Journal volume & issue
Vol. 23, no. 4
pp. 1061 – 1070

Abstract

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Two new of N’-benzylidenebenzohydrazide (NBB) derivatives were successfully synthesized and yielded 50–58%. FTIR, ESI-MS, 1H-NMR and 13C-NMR were used to investigate the characteristic of NBB derivates. The structure and relationship of NBB derivatives into α-glucosidase and α-amylase as good targets for diabetes treatment were evaluated using in silico screening. Molecular Mechanics-Poisson Boltzmann/Generalized Born Surface Area (MM-PB/GBSA) was used to calculate the free binding energy (ΔGbind (MM-GBSA)) of NBB to α-glucosidase and α-amylase receptors showed that the results of −0.45 and −20.79 kcal/mol respectively. In the ortho position, NBB derivatives exhibited electron donating groups (EDG like -OCH3, -OH and -Cl with binding free energies of −21.94, −6.71 and 21.94, respectively, and acarbose, a native ligand energy of 32.62 kcal/mol. In addition, the binding free energy of N-2-(-OCH3, -OH and -Cl)-NBB to the α-amylase receptor showed the number of −39.33, −43.96, −42.81, respectively and −46.51 kcal/mol in comparing with a native ligand. As a result, it was found that all the NBB derivatives were able to interact with several amino acids in the α-glucosidase cavity as well as the native ones, including Ala281, Asp282, and Asp616. NBB and native ligand showed similar interaction between α-amylase with Gly110 amino acid residue.

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