PLoS Biology (Jun 2023)

Structural basis for proapoptotic activation of Bak by the noncanonical BH3-only protein Pxt1.

  • Dahwan Lim,
  • So-Hui Choe,
  • Sein Jin,
  • Seulgi Lee,
  • Younjin Kim,
  • Ho-Chul Shin,
  • Joon Sig Choi,
  • Doo-Byoung Oh,
  • Seung Jun Kim,
  • Jinho Seo,
  • Bonsu Ku

DOI
https://doi.org/10.1371/journal.pbio.3002156
Journal volume & issue
Vol. 21, no. 6
p. e3002156

Abstract

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Bak is a critical executor of apoptosis belonging to the Bcl-2 protein family. Bak contains a hydrophobic groove where the BH3 domain of proapoptotic Bcl-2 family members can be accommodated, which initiates its activation. Once activated, Bak undergoes a conformational change to oligomerize, which leads to mitochondrial destabilization and the release of cytochrome c into the cytosol and eventual apoptotic cell death. In this study, we investigated the molecular aspects and functional consequences of the interaction between Bak and peroxisomal testis-specific 1 (Pxt1), a noncanonical BH3-only protein exclusively expressed in the testis. Together with various biochemical approaches, this interaction was verified and analyzed at the atomic level by determining the crystal structure of the Bak-Pxt1 BH3 complex. In-depth biochemical and cellular analyses demonstrated that Pxt1 functions as a Bak-activating proapoptotic factor, and its BH3 domain, which mediates direct intermolecular interaction with Bak, plays a critical role in triggering apoptosis. Therefore, this study provides a molecular basis for the Pxt1-mediated novel pathway for the activation of apoptosis and expands our understanding of the cell death signaling coordinated by diverse BH3 domain-containing proteins.