iScience (Sep 2022)

Scale space detector for analyzing spatiotemporal ventricular contractility and nuclear morphogenesis in zebrafish

  • Tanveer Teranikar,
  • Cameron Villarreal,
  • Nabid Salehin,
  • Toluwani Ijaseun,
  • Jessica Lim,
  • Cynthia Dominguez,
  • Vivian Nguyen,
  • Hung Cao,
  • Cheng–Jen Chuong,
  • Juhyun Lee

Journal volume & issue
Vol. 25, no. 9
p. 104876

Abstract

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Summary: In vivo quantitative assessment of structural and functional biomarkers is essential for characterizing the pathophysiology of congenital disorders. In this regard, fixed tissue analysis has offered revolutionary insights into the underlying cellular architecture. However, histological analysis faces major drawbacks with respect to lack of spatiotemporal sampling and tissue artifacts during sample preparation. This study demonstrates the potential of light sheet fluorescence microscopy (LSFM) as a non-invasive, 4D (3days + time) optical sectioning tool for revealing cardiac mechano-transduction in zebrafish. Furthermore, we have described the utility of a scale and size-invariant feature detector, for analyzing individual morphology of fused cardiomyocyte nuclei and characterizing zebrafish ventricular contractility.

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