Nature Communications (Mar 2020)

Prioritizing disease and trait causal variants at the TNFAIP3 locus using functional and genomic features

  • John P. Ray,
  • Carl G. de Boer,
  • Charles P. Fulco,
  • Caleb A. Lareau,
  • Masahiro Kanai,
  • Jacob C. Ulirsch,
  • Ryan Tewhey,
  • Leif S. Ludwig,
  • Steven K. Reilly,
  • Drew T. Bergman,
  • Jesse M. Engreitz,
  • Robbyn Issner,
  • Hilary K. Finucane,
  • Eric S. Lander,
  • Aviv Regev,
  • Nir Hacohen

DOI
https://doi.org/10.1038/s41467-020-15022-4
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 13

Abstract

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While genome-wide association studies have yielded thousands of trait-associated loci, identifying causal variants remains challenging. Here, the authors perform seven genomics assays in various cell types to prioritize genetic variants in the TNFAIP3 locus, and report high-priority variants within disease-associated haplotypes.