Nature Communications (Mar 2021)

Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences

  • Anna G. Green,
  • Hadeer Elhabashy,
  • Kelly P. Brock,
  • Rohan Maddamsetti,
  • Oliver Kohlbacher,
  • Debora S. Marks

DOI
https://doi.org/10.1038/s41467-021-21636-z
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 12

Abstract

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Our understanding of the residue-level details of protein interactions remains incomplete. Here, the authors show sequence coevolution can be used to infer interacting proteins with residue-level details, including predicting 467 interactions de novo in the Escherichia coli cell envelope proteome.