Nature Communications (Jan 2018)
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
- Yoann Seeleuthner,
- Samuel Mondy,
- Vincent Lombard,
- Quentin Carradec,
- Eric Pelletier,
- Marc Wessner,
- Jade Leconte,
- Jean-François Mangot,
- Julie Poulain,
- Karine Labadie,
- Ramiro Logares,
- Shinichi Sunagawa,
- Véronique de Berardinis,
- Marcel Salanoubat,
- Céline Dimier,
- Stefanie Kandels-Lewis,
- Marc Picheral,
- Sarah Searson,
- Tara Oceans Coordinators,
- Stephane Pesant,
- Nicole Poulton,
- Ramunas Stepanauskas,
- Peer Bork,
- Chris Bowler,
- Pascal Hingamp,
- Matthew B. Sullivan,
- Daniele Iudicone,
- Ramon Massana,
- Jean-Marc Aury,
- Bernard Henrissat,
- Eric Karsenti,
- Olivier Jaillon,
- Mike Sieracki,
- Colomban de Vargas,
- Patrick Wincker
Affiliations
- Yoann Seeleuthner
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Samuel Mondy
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Vincent Lombard
- Centre National de la Recherche Scientifique
- Quentin Carradec
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Eric Pelletier
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Marc Wessner
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Jade Leconte
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Jean-François Mangot
- Department of Marine Biology and Oceanography, Institut de Ciències del Mar (CSIC)
- Julie Poulain
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Karine Labadie
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Ramiro Logares
- Department of Marine Biology and Oceanography, Institut de Ciències del Mar (CSIC)
- Shinichi Sunagawa
- Structural and Computational Biology, European Molecular Biology Laboratory
- Véronique de Berardinis
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Marcel Salanoubat
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Céline Dimier
- CNRS
- Stefanie Kandels-Lewis
- Structural and Computational Biology, European Molecular Biology Laboratory
- Marc Picheral
- Sorbonne Universités, UPMC Université Paris 06, CNRS, Laboratoire d’océanographie de Villefranche (LOV), Observatoire Océanologique
- Sarah Searson
- Department of Oceanography, University of Hawaii
- Tara Oceans Coordinators
- Stephane Pesant
- PANGAEA, Data Publisher for Earth and Environmental Science, University of Bremen
- Nicole Poulton
- Bigelow Laboratory for Ocean Sciences
- Ramunas Stepanauskas
- Bigelow Laboratory for Ocean Sciences
- Peer Bork
- Structural and Computational Biology, European Molecular Biology Laboratory
- Chris Bowler
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS)
- Pascal Hingamp
- Aix Marseille Univ, Université de Toulon, CNRS, IRD
- Matthew B. Sullivan
- Departments of Microbiology and Civil, Environmental and Geodetic Engineering, Ohio State University
- Daniele Iudicone
- Stazione Zoologica Anton Dohrn
- Ramon Massana
- Department of Marine Biology and Oceanography, Institut de Ciències del Mar (CSIC)
- Jean-Marc Aury
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Bernard Henrissat
- Centre National de la Recherche Scientifique
- Eric Karsenti
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS)
- Olivier Jaillon
- CEA - Institut de biologie François Jacob, GENOSCOPE
- Mike Sieracki
- National Science Foundation
- Colomban de Vargas
- CNRS
- Patrick Wincker
- CEA - Institut de biologie François Jacob, GENOSCOPE
- DOI
- https://doi.org/10.1038/s41467-017-02235-3
- Journal volume & issue
-
Vol. 9,
no. 1
pp. 1 – 10
Abstract
The biology of many marine protists, such as stramenopiles, remains obscure. Here, the authors exploit single-cell genomics and metagenomics to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles.
