A novel in‐frame deletion in KIF5C gene causes infantile onset epilepsy and psychomotor retardation
Santasree Banerjee,
Qiang Zhao,
Bo Wang,
Jiale Qin,
Xin Yuan,
Ziwei Lou,
Weizeng Zheng,
Huanguo Li,
Xiaojun Wang,
Xiawei Cheng,
Yu Zhu,
Fan Lin,
Fan Yang,
Junyu Xu,
Anjana Munshi,
Parimal Das,
Yuanfeng Zhou,
Kausik Mandal,
Yi Wang,
Muhammad Ayub,
Nobutaka Hirokawa,
Yongmei Xi,
Guangfu Chen,
Chen Li
Affiliations
Santasree Banerjee
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Qiang Zhao
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Bo Wang
Department of Pediatrics Shenzhen Second People's Hospital The First Affiliated Hospital of Shenzhen University Health Science Center Shenzhen China
Jiale Qin
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Xin Yuan
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Ziwei Lou
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Weizeng Zheng
Department of Radiology Women's Hospital Zhejiang University School of Medicine Hangzhou China
Huanguo Li
Department of Radiology Hangzhou Hospital of Traditional Chinese Medicine Hangzhou China
Xiaojun Wang
Department of Neurobiology, Department of Rehabilitation and Department of Internal Medicine of the Children's Hospital, Zhejiang University School of Medicine National Clinical Research Center for Child Health Hangzhou China
Xiawei Cheng
School of PharmacyEast China University of Science and TechnologyShanghaiChina
Yu Zhu
Department of Neurobiology, Department of Rehabilitation and Department of Internal Medicine of the Children's Hospital, Zhejiang University School of Medicine National Clinical Research Center for Child Health Hangzhou China
Fan Lin
Department of Cell BiologySchool of Basic Medical SciencesNanjing Medical UniversityNanjingChina
Fan Yang
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Junyu Xu
Department of Neurobiology, Department of Rehabilitation and Department of Internal Medicine of the Children's Hospital, Zhejiang University School of Medicine National Clinical Research Center for Child Health Hangzhou China
Anjana Munshi
Department of Human Genetics and Molecular MedicineCentral University of PunjabBathindaIndia
Parimal Das
Centre for Genetic DisordersBanaras Hindu UniversityVaranasiIndia
Yuanfeng Zhou
Department of Neurology and Epilepsy CenterChildren's Hospital of Fudan UniversityShanghaiChina
Kausik Mandal
Department of Medical GeneticsSanjay Gandhi Postgraduate Institute of Medical SciencesLucknowUttar PradeshIndia
Yi Wang
Department of Neurology and Epilepsy CenterChildren's Hospital of Fudan UniversityShanghaiChina
Muhammad Ayub
Department of PsychiatryUniversity College LondonLondonUK
Nobutaka Hirokawa
Department of Cell Biology and AnatomyGraduate School of MedicineThe University of TokyoTokyoJapan
Yongmei Xi
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Guangfu Chen
Department of Pediatrics Shenzhen Second People's Hospital The First Affiliated Hospital of Shenzhen University Health Science Center Shenzhen China
Chen Li
Department of Human Genetics and Department of Ultrasound, Women's Hospital School of Basic Medical Science Zhejiang Provincial Key Laboratory of Genetic and Developmental Disorders Zhejiang University School of Medicine Hangzhou China
Abstract Motor proteins, encoded by Kinesin superfamily (KIF) genes, are critical for brain development and plasticity. Increasing studies reported KIF’s roles in neurodevelopmental disorders. Here, a 6 years and 3 months‐old Chinese boy with markedly symptomatic epilepsy, intellectual disability, brain atrophy, and psychomotor retardation was investigated. His parents and younger sister were phenotypically normal and had no disease‐related family history. Whole exome sequencing identified a novel heterozygous in‐frame deletion (c.265_267delTCA) in exon 3 of the KIF5C in the proband, resulting in the removal of evolutionarily highly conserved p.Ser90, located in its ATP‐binding domain. Sanger sequencing excluded the proband's parents and family members from harboring this variant. The activity of ATP hydrolysis in vitro was significantly reduced as predicted. Immunofluorescence studies showed wild‐type KIF5C was widely distributed throughout the cytoplasm, while mutant KIF5C was colocalized with microtubules. The live‐cell imaging of the cargo‐trafficking assay revealed that mutant KIF5C lost the peroxisome‐transporting ability. Drosophila models also confirmed p.Ser90del's essential role in nervous system development. This study emphasized the importance of the KIF5C gene in intracellular cargo‐transport as well as germline variants that lead to neurodevelopmental disorders and might enable clinicians for timely and accurate diagnosis and disease management in the future.