A Denoise Network for Structured Illumination Microscopy with Low-Light Exposure

Abstract

Super-resolution structured illumination microscopy (SR-SIM) is one of the important techniques that are most suitable for live-cell imaging. The reconstructed SR-SIM images are noisy once the raw images are recorded with low-light exposure. Here, we propose a new network (entitled the ND-SIM network) to denoise the SR images reconstructed using frequency-domain algorithms (FDAs). We demonstrate that ND-SIM can yield artifact-free SR images using raw images with an average photon count down to 20 per pixel while achieving comparable resolution to the ground truth (GT) obtained with high-light exposure. We can envisage that the ND-SIM will be widely applied for the long-term, super-resolution live-cell imaging of various bioprocesses in the future.

Keywords

• structured illumination microscopy (SIM)
• deep learning
• super resolution
• image reconstruction
• image denoise