Segmentation of cDNA Microarray Images using Parallel Spectral Clustering

Abstract

Microarray technology generates large amounts of expression level of genes to be analyzed simultaneously. This analysis implies microarray image segmentation to extract the quantitative information from spots. Spectral clustering is one of the most relevant unsupervised methods able to gather data without a priori information on shapes or locality. We propose and test on microarray images a parallel strategy for the Spectral Clustering method based on domain decomposition with a criterion to determine the number of clusters.

Keywords

• spectral clustering
• domain decomposition
• image segmentation
• microarray image