Mitochondrial DNA. Part B. Resources (Aug 2021)
The complete mitochondrial genome of the strawberry aphid Chaetosiphon fragaefolii Cockerell, 1901 (Hemiptera: Aphididae) from California, USA
- Miguel Acosta,
- Diana Alcantar,
- Ivan Alier-Reyes,
- Carlos Alvarez,
- Crystal B. Arroyo,
- David Calderon,
- David Cardenas,
- Alejandro R. Castro,
- Janelle K. Companion,
- Cristian Constante,
- Evelyn S. Diaz Telles,
- Gabriel Fletes,
- Fatima C. Gama,
- Celia Garcia Perez,
- Abigail Garcia,
- Bailey Garcia,
- Brandon S. Gutierrez,
- Karina L. Guzman,
- Cecilia Hernandez,
- Jeffery R. Hughey,
- Monica Ibarra Flores,
- Adilene I. Jacobo,
- Brianna Lopez,
- Norma C. Lopez-De Leon,
- Jaden D. Martinez,
- Nayelli Mendoza,
- Kimberly Perez,
- Lucio J. Perez,
- Milagros Perez-Moreno,
- Caitlin D. Pineda,
- Elizabeth Pinedo,
- Julissa G. Portillo,
- Anais Rico,
- Laura V. Ruiz,
- Genevie M. Serrano,
- Kalia M. Sheldon,
- Hiroki Terada,
- Victoria A. Trujillo,
- Clarissa Vazquez-Ramos,
- Frank Wang,
- Dawn Flora,
- Felipe G. Zavala,
- Hartnell College Genomics Group
Affiliations
- Miguel Acosta
- Division of Mathematics, Science, and Engineering, Hartnell College
- Diana Alcantar
- Division of Mathematics, Science, and Engineering, Hartnell College
- Ivan Alier-Reyes
- Division of Mathematics, Science, and Engineering, Hartnell College
- Carlos Alvarez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Crystal B. Arroyo
- Division of Mathematics, Science, and Engineering, Hartnell College
- David Calderon
- Division of Mathematics, Science, and Engineering, Hartnell College
- David Cardenas
- Division of Mathematics, Science, and Engineering, Hartnell College
- Alejandro R. Castro
- Division of Mathematics, Science, and Engineering, Hartnell College
- Janelle K. Companion
- Division of Mathematics, Science, and Engineering, Hartnell College
- Cristian Constante
- Division of Mathematics, Science, and Engineering, Hartnell College
- Evelyn S. Diaz Telles
- Division of Mathematics, Science, and Engineering, Hartnell College
- Gabriel Fletes
- Division of Mathematics, Science, and Engineering, Hartnell College
- Fatima C. Gama
- Division of Mathematics, Science, and Engineering, Hartnell College
- Celia Garcia Perez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Abigail Garcia
- Division of Mathematics, Science, and Engineering, Hartnell College
- Bailey Garcia
- Division of Mathematics, Science, and Engineering, Hartnell College
- Brandon S. Gutierrez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Karina L. Guzman
- Division of Mathematics, Science, and Engineering, Hartnell College
- Cecilia Hernandez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Jeffery R. Hughey
- Division of Mathematics, Science, and Engineering, Hartnell College
- Monica Ibarra Flores
- Division of Mathematics, Science, and Engineering, Hartnell College
- Adilene I. Jacobo
- Division of Mathematics, Science, and Engineering, Hartnell College
- Brianna Lopez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Norma C. Lopez-De Leon
- Division of Mathematics, Science, and Engineering, Hartnell College
- Jaden D. Martinez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Nayelli Mendoza
- Division of Mathematics, Science, and Engineering, Hartnell College
- Kimberly Perez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Lucio J. Perez
- Division of Mathematics, Science, and Engineering, Hartnell College
- Milagros Perez-Moreno
- Division of Mathematics, Science, and Engineering, Hartnell College
- Caitlin D. Pineda
- Division of Mathematics, Science, and Engineering, Hartnell College
- Elizabeth Pinedo
- Division of Mathematics, Science, and Engineering, Hartnell College
- Julissa G. Portillo
- Division of Mathematics, Science, and Engineering, Hartnell College
- Anais Rico
- Division of Mathematics, Science, and Engineering, Hartnell College
- Laura V. Ruiz
- Division of Mathematics, Science, and Engineering, Hartnell College
- Genevie M. Serrano
- Division of Mathematics, Science, and Engineering, Hartnell College
- Kalia M. Sheldon
- Division of Mathematics, Science, and Engineering, Hartnell College
- Hiroki Terada
- Division of Mathematics, Science, and Engineering, Hartnell College
- Victoria A. Trujillo
- Division of Mathematics, Science, and Engineering, Hartnell College
- Clarissa Vazquez-Ramos
- Division of Mathematics, Science, and Engineering, Hartnell College
- Frank Wang
- Division of Mathematics, Science, and Engineering, Hartnell College
- Dawn Flora
- Division of Mathematics, Science, and Engineering, Hartnell College
- Felipe G. Zavala
- Division of Mathematics, Science, and Engineering, Hartnell College
- Hartnell College Genomics Group
- Division of Mathematics, Science, and Engineering, Hartnell College
- DOI
- https://doi.org/10.1080/23802359.2021.1915206
- Journal volume & issue
-
Vol. 6,
no. 8
pp. 2373 – 2375
Abstract
The aphid Chaetosiphon fragaefolii Cockerell, 1901 is an agricultural pest and known vector of strawberry viruses. To better understand its biology and systematics, we performed a genomic analysis on C. fragaefolii collected from Quinalt strawberry plants from Pacific Grove, Monterey county, California, USA using Oxford Nanopore and Illumina sequencing. The resulting data were used to assemble the aphids complete mitogenome. The mitogenome of C. fragaefolii is 16,108 bp in length and contains 2 rRNA, 13 protein-coding, and 22 tRNA genes (GenBank accession number LC590896). The mitogenome is similar in content and organization to other Aphididae. Phylogenetic analysis of the C. fragaefolii mitogenome resolved it in a fully supported clade in the tribe Macrosiphini. Analysis of the cox1 barcode sequence of C. fragaefolii from California found exact and nearly identical sequences to C. fragaefolii and Chaetosiphon thomasi Hille Ris Lambers, 1953, suggesting the two species are conspecific.
Keywords
