Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592T

Navjot Kaur; Shailesh Kumar; Shanmugam Mayilraj

doi:10.1016/j.gdata.2013.10.006

Genomics Data (Dec 2014)

Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592T

Navjot Kaur,
Shailesh Kumar,
Shanmugam Mayilraj

Affiliations

Navjot Kaur: Microbial Type Culture Collection and Gene Bank (MTCC), CSIR-Institute of Microbial Technology, Chandigarh 160036, India
Shailesh Kumar: Bioinformatics Centre, CSIR-Institute of Microbial Technology, Chandigarh 160036, India
Shanmugam Mayilraj: Microbial Type Culture Collection and Gene Bank (MTCC), CSIR-Institute of Microbial Technology, Chandigarh 160036, India

DOI: https://doi.org/10.1016/j.gdata.2013.10.006
Journal volume & issue: Vol. 2, no. C
pp. 16 – 17

Abstract

Read online

We report the 9.0-Mb draft genome of Amycolatopsis vancoresmycina strain DSM 44592T, isolated from Indian soil sample; produces antibiotic vancoresmycin. Draft genome of strain DSM44592T consists of 9,037,069 bp with a G+C content of 71.79% and 8340 predicted protein coding genes and 57 RNAs. RAST annotation indicates that strains Streptomyces sp. AA4 (score 521), Saccharomonospora viridis DSM 43017 (score 400) and Actinosynnema mirum DSM 43827 (score 372) are the closest neighbors of the strain DSM 44592T.

Published in Genomics Data

ISSN: 2213-5960 (Online)
Publisher: Elsevier
Country of publisher: United States
LCC subjects: Science: Biology (General): Genetics
Website: http://www.journals.elsevier.com/genomics-data/

About the journal

Abstract

Keywords