Molecular Medicine (Jun 2025)

Nuclear VPS35 attenuates NHEJ repair by sequestering Ku protein

  • Luping Zhang,
  • Yonghong Nie,
  • Tuo Tang,
  • Yanji Lu,
  • Wenlong Li,
  • Xian Hong,
  • Qiang Li,
  • Aixue Zheng,
  • Yongpei Li,
  • Jianwen Zhou,
  • Li Fan,
  • Tao Wang,
  • Zhihui Deng

DOI
https://doi.org/10.1186/s10020-025-01288-1
Journal volume & issue
Vol. 31, no. 1
pp. 1 – 17

Abstract

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Abstract Vacuolar protein sorting-associated protein 35 (VPS35), a pivotal constituent of the retromer complex, mediates the retrograde trafficking of endosomal cargoes in the cytoplasm. Intriguingly, VPS35 displays a dual localization pattern, residing both in the cytoplasm and the nucleus, but its nuclear role remains elusive. In this study, we unravel a nuclear function of VPS35, demonstrating it impedes DNA repair by inhibiting non-homologous end joining (NHEJ). Mechanistically, VPS35 interacts with the Ku protein, sequestering it away from DNA damage sites. Consequently, nuclear VPS35 halts the activation of DNA-PKcs, hindering the recruitment of XLF and DNA-Ligase 4, ultimately suppressing NHEJ efficiency. Furthermore, in response to DNA damage, VPS35 dissociates from Ku protein and orchestrates a strategic relocation from the nucleus to the cytoplasm. Thus, our findings suggest VPS35 attenuates NHEJ repair by restricting Ku protein availability at DNA damage sites, offering a potential avenue for fine-tuning DNA repair efficiency.

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