Genetic characterization of blaCTX-M-65 in Salmonella Infantis and blaCMY-2 in Salmonella Heidelberg isolated from fresh ground turkey meat sold in supermarkets in Los Andes and San Felipe, Chile

Abstract

Annually, food poisoning caused by non-typhoidal Salmonella (NTS) accounts for 40 million foodborne infections worldwide. Outbreaks due to multidrug-resistant NTS strains are associated with the consumption of poultry products. We aimed to determine the proportion of NTS in ground turkey meat available at supermarkets in two locations in Chile, characterizing their serovars, virulence traits, and antimicrobial resistance profiles. Between September and December 2018, we analyzed 47 samples of packed ground turkey meat purchased at 13 supermarkets. NTS were identified by MALDI-TOF, and antimicrobial susceptibility was determined by the disk-diffusion agar method. Whole genome sequencing was performed with MiSeq (Illumina) followed by Nullarbor analysis. NTS was detected in 6 out of 47 samples (12.8 %, 95 %CI: 6.0–25.1 %), identifying S. enterica serovar Infantis (n=4 isolates), serovar Agona (n=1 isolate), and serovar Heidelberg (n=1 isolate), respectively. S. Infantis belonged to sequence type (ST)32, differentiating two clones, whereas the S. Agona was ST13 and S. Heidelberg was ST15. S. Infantis strains were multidrug antibiotic resistant, harboring blaCTX-M-65, tetA, and mutations that confer fosfomycin resistance. Serovars Agona and Heidelberg showed tetracycline (tetB) and fosfomycin resistance (fosA7). Additionally, serovar Heidelberg showed resistance to sulfamethoxazole-trimethoprim, aminoglycosides, and carried the blaCMY-2 gene. This is the first report in Chile about NTS detected in raw ground turkey meat available in supermarkets. S. Infantis and S. Agona strains showed a phylogenetic relationship with strains of the same serovars isolated from the environment in our country. This situation would impact food poisoning and the dissemination of bacterial resistance between animals, humans, and the environment.

Keywords

• Antimicrobial resistance
• ESBL-production
• Turkey meat
• Non-typhoidal Salmonella
• Salmonella Infantis
• Salmonella Agona