Cell Reports (Dec 2023)

The MHC-E peptide ligands for checkpoint CD94/NKG2A are governed by inflammatory signals, whereas LILRB1/2 receptors are peptide indifferent

  • Jim Middelburg,
  • Soroush Ghaffari,
  • Tom A.W. Schoufour,
  • Marjolein Sluijter,
  • Gaby Schaap,
  • Büsra Göynük,
  • Benedetta M. Sala,
  • Lejla Al-Tamimi,
  • Ferenc Scheeren,
  • Kees L.M.C. Franken,
  • Jimmy J.L.L. Akkermans,
  • Birol Cabukusta,
  • Simone A. Joosten,
  • Ian Derksen,
  • Jacques Neefjes,
  • Sjoerd H. van der Burg,
  • Adnane Achour,
  • Ruud H.M. Wijdeven,
  • Jon Weidanz,
  • Thorbald van Hall

Journal volume & issue
Vol. 42, no. 12
p. 113516

Abstract

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Summary: The immune checkpoint NKG2A/CD94 is a promising target for cancer immunotherapy, and its ligand major histocompatibility complex E (MHC-E) is frequently upregulated in cancer. NKG2A/CD94-mediated inhibition of lymphocytes depends on the presence of specific leader peptides in MHC-E, but when and where they are presented in situ is unknown. We apply a nanobody specific for the Qdm/Qa-1b complex, the NKG2A/CD94 ligand in mouse, and find that presentation of Qdm peptide depends on every member of the endoplasmic reticulum-resident peptide loading complex. With a turnover rate of 30 min, the Qdm peptide reflects antigen processing capacity in real time. Remarkably, Qdm/Qa-1b complexes require inflammatory signals for surface expression in situ, despite the broad presence of Qa-1b molecules in homeostasis. Furthermore, we identify LILRB1 as a functional inhibition receptor for MHC-E in steady state. These data provide a molecular understanding of NKG2A blockade in immunotherapy and assign MHC-E as a convergent ligand for multiple immune checkpoints.

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