The MHC-E peptide ligands for checkpoint CD94/NKG2A are governed by inflammatory signals, whereas LILRB1/2 receptors are peptide indifferent
Jim Middelburg,
Soroush Ghaffari,
Tom A.W. Schoufour,
Marjolein Sluijter,
Gaby Schaap,
Büsra Göynük,
Benedetta M. Sala,
Lejla Al-Tamimi,
Ferenc Scheeren,
Kees L.M.C. Franken,
Jimmy J.L.L. Akkermans,
Birol Cabukusta,
Simone A. Joosten,
Ian Derksen,
Jacques Neefjes,
Sjoerd H. van der Burg,
Adnane Achour,
Ruud H.M. Wijdeven,
Jon Weidanz,
Thorbald van Hall
Affiliations
Jim Middelburg
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Soroush Ghaffari
Department of Biology, College of Science, The University of Texas at Arlington, Arlington, TX, USA
Tom A.W. Schoufour
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Marjolein Sluijter
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Gaby Schaap
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Büsra Göynük
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Benedetta M. Sala
Science for Life Laboratory, Department of Medicine, Karolinska Institute & Division of Infectious Diseases, Karolinska University Hospital, 171 65 Solna, Sweden
Lejla Al-Tamimi
Science for Life Laboratory, Department of Medicine, Karolinska Institute & Division of Infectious Diseases, Karolinska University Hospital, 171 65 Solna, Sweden
Ferenc Scheeren
Department of Dermatology, Leiden University Medical Center, Leiden, the Netherlands
Kees L.M.C. Franken
Department of Infectious Diseases, Leiden University Medical Center, Leiden, the Netherlands
Jimmy J.L.L. Akkermans
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Birol Cabukusta
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Simone A. Joosten
Department of Infectious Diseases, Leiden University Medical Center, Leiden, the Netherlands
Ian Derksen
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Jacques Neefjes
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Sjoerd H. van der Burg
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Adnane Achour
Science for Life Laboratory, Department of Medicine, Karolinska Institute & Division of Infectious Diseases, Karolinska University Hospital, 171 65 Solna, Sweden
Ruud H.M. Wijdeven
Department of Cell and Chemical Biology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands
Jon Weidanz
Abexxa Biologics, Inc., Arlington, TX, USA; College of Nursing and Health Innovation, The University of Texas at Arlington, Arlington, TX, USA
Thorbald van Hall
Department of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, the Netherlands; Corresponding author
Summary: The immune checkpoint NKG2A/CD94 is a promising target for cancer immunotherapy, and its ligand major histocompatibility complex E (MHC-E) is frequently upregulated in cancer. NKG2A/CD94-mediated inhibition of lymphocytes depends on the presence of specific leader peptides in MHC-E, but when and where they are presented in situ is unknown. We apply a nanobody specific for the Qdm/Qa-1b complex, the NKG2A/CD94 ligand in mouse, and find that presentation of Qdm peptide depends on every member of the endoplasmic reticulum-resident peptide loading complex. With a turnover rate of 30 min, the Qdm peptide reflects antigen processing capacity in real time. Remarkably, Qdm/Qa-1b complexes require inflammatory signals for surface expression in situ, despite the broad presence of Qa-1b molecules in homeostasis. Furthermore, we identify LILRB1 as a functional inhibition receptor for MHC-E in steady state. These data provide a molecular understanding of NKG2A blockade in immunotherapy and assign MHC-E as a convergent ligand for multiple immune checkpoints.