Molecular Therapy: Nucleic Acids (Jun 2019)

Long Noncoding RNA SBF2-AS1 Is Critical for Tumorigenesis of Early-Stage Lung Adenocarcinoma

  • Rui Chen,
  • Wenjia Xia,
  • Siwei Wang,
  • Youtao Xu,
  • Zhifei Ma,
  • Weizhang Xu,
  • Erbao Zhang,
  • Jie Wang,
  • Tian Fang,
  • Quan’an Zhang,
  • Gaochao Dong,
  • William Chi-shing Cho,
  • Patrick C. Ma,
  • Giovanni Brandi,
  • Simona Tavolari,
  • Peter Ujhazy,
  • Giulio Metro,
  • Helmut H. Popper,
  • Rong Yin,
  • Mantang Qiu,
  • Lin Xu

Journal volume & issue
Vol. 16
pp. 543 – 553

Abstract

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Emerging evidence demonstrates that long non-coding RNAs (lncRNAs) are deeply involved in the development of various cancers. This study identified that SBF2-AS1, an early-stage-specific lncRNA, is critical for the tumorigenesis of lung adenocarcinoma (LUAD). We first analyzed LUAD transcriptome data from The Cancer Genome Atlas and the GEO database by weighted gene co-expression network analysis (WGCNA). Five early LUAD-specific lncRNAs were filtered out, and only SBF2-AS1 was upregulated in LUAD. High expression of SBF2-AS1 indicates poor survival of LUAD, especially the early-stage LUAD, but not lung squamous cell carcinoma. SBF2-AS1 promotes LUAD cells proliferation in vitro, and RNA-sequencing data shows that many cell-cycle-related genes were downregulated after SBF2-AS1 knockdown. Mechanically, SBF2-AS1 could competitively bind with miR-338-3p and miR-362-3p to increase E2F1 expression. Finally, we show that the SBF2-AS1-miR-338-3p/362-3p-E2F1 axis could promote LUAD tumorigenesis in vitro and in vivo. Our study demonstrates that SBF2-AS1, an early-stage-specific lncRNA, promotes LUAD tumorigenesis by sponging miR-338-3p and miR-362-3p and increasing E2F1 expression. The SBF2-AS1-miR-338-3p/362-3p-E2F1 regulatory axis may serve as a prognostic marker and potential therapeutic target for LUAD. Keywords: WGCNA, lung adenocarcinoma, tumorigenesis, ceRNA, SBF2-AS1, lncRNA