Nature Communications (Oct 2020)
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
- Shingo Miyauchi,
- Enikő Kiss,
- Alan Kuo,
- Elodie Drula,
- Annegret Kohler,
- Marisol Sánchez-García,
- Emmanuelle Morin,
- Bill Andreopoulos,
- Kerrie W. Barry,
- Gregory Bonito,
- Marc Buée,
- Akiko Carver,
- Cindy Chen,
- Nicolas Cichocki,
- Alicia Clum,
- David Culley,
- Pedro W. Crous,
- Laure Fauchery,
- Mariangela Girlanda,
- Richard D. Hayes,
- Zsófia Kéri,
- Kurt LaButti,
- Anna Lipzen,
- Vincent Lombard,
- Jon Magnuson,
- François Maillard,
- Claude Murat,
- Matt Nolan,
- Robin A. Ohm,
- Jasmyn Pangilinan,
- Maíra de Freitas Pereira,
- Silvia Perotto,
- Martina Peter,
- Stephanie Pfister,
- Robert Riley,
- Yaron Sitrit,
- J. Benjamin Stielow,
- Gergely Szöllősi,
- Lucia Žifčáková,
- Martina Štursová,
- Joseph W. Spatafora,
- Leho Tedersoo,
- Lu-Min Vaario,
- Akiyoshi Yamada,
- Mi Yan,
- Pengfei Wang,
- Jianping Xu,
- Tom Bruns,
- Petr Baldrian,
- Rytas Vilgalys,
- Christophe Dunand,
- Bernard Henrissat,
- Igor V. Grigoriev,
- David Hibbett,
- László G. Nagy,
- Francis M. Martin
Affiliations
- Shingo Miyauchi
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Enikő Kiss
- Synthetic and Systems Biology Unit, Biological Research Centre
- Alan Kuo
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Elodie Drula
- INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques
- Annegret Kohler
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Marisol Sánchez-García
- Biology Department, Clark University, Lasry Center for Bioscience
- Emmanuelle Morin
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Bill Andreopoulos
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Kerrie W. Barry
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Gregory Bonito
- Plant Soil and Microbial Sciences, Michigan State University
- Marc Buée
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Akiko Carver
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Cindy Chen
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Nicolas Cichocki
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Alicia Clum
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- David Culley
- Chemical & Biological Processes Development Group, Pacific Northwest National Laboratory
- Pedro W. Crous
- Westerdijk Fungal Biodiversity Institute
- Laure Fauchery
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Mariangela Girlanda
- Department of Life Sciences and Systems Biology, University of Torino
- Richard D. Hayes
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Zsófia Kéri
- Synthetic and Systems Biology Unit, Biological Research Centre
- Kurt LaButti
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Anna Lipzen
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Vincent Lombard
- INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques
- Jon Magnuson
- Chemical & Biological Processes Development Group, Pacific Northwest National Laboratory
- François Maillard
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Claude Murat
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Matt Nolan
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Robin A. Ohm
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Jasmyn Pangilinan
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Maíra de Freitas Pereira
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- Silvia Perotto
- Department of Life Sciences and Systems Biology, University of Torino
- Martina Peter
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL
- Stephanie Pfister
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL
- Robert Riley
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Yaron Sitrit
- The Jacob Blaustein Institutes for Desert Research, Bergman Campus, Ben-Gurion University of The Negev
- J. Benjamin Stielow
- Westerdijk Fungal Biodiversity Institute
- Gergely Szöllősi
- Synthetic and Systems Biology Unit, Biological Research Centre
- Lucia Žifčáková
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences
- Martina Štursová
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences
- Joseph W. Spatafora
- Department Botany & Plant Pathology, Oregon State University
- Leho Tedersoo
- Natural History Museum, University of Tartu
- Lu-Min Vaario
- Department of Forest Sciences, University of Helsinki
- Akiyoshi Yamada
- Institute of Mountain Science, Faculty of Agriculture, Shinshu University, Minami-minowa, Kami-ina
- Mi Yan
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- Pengfei Wang
- Department of Key Laboratory, The 2nd Affiliated Hospital of Kunming Medical University
- Jianping Xu
- Department of Biology, McMaster University
- Tom Bruns
- Department of Plant and Microbial Biology, University of California – Berkeley
- Petr Baldrian
- Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences
- Rytas Vilgalys
- Department of Biology, Duke University
- Christophe Dunand
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS
- Bernard Henrissat
- INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques
- Igor V. Grigoriev
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
- David Hibbett
- Biology Department, Clark University, Lasry Center for Bioscience
- László G. Nagy
- Synthetic and Systems Biology Unit, Biological Research Centre
- Francis M. Martin
- Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy
- DOI
- https://doi.org/10.1038/s41467-020-18795-w
- Journal volume & issue
-
Vol. 11,
no. 1
pp. 1 – 17
Abstract
Mycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the convergent origins of the ectomycorrhizal guild.
