eLife (Sep 2019)

A new class of disordered elements controls DNA replication through initiator self-assembly

  • Matthew W Parker,
  • Maren Bell,
  • Mustafa Mir,
  • Jonchee A Kao,
  • Xavier Darzacq,
  • Michael R Botchan,
  • James M Berger

DOI
https://doi.org/10.7554/eLife.48562
Journal volume & issue
Vol. 8

Abstract

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The initiation of DNA replication in metazoans occurs at thousands of chromosomal sites known as origins. At each origin, the Origin Recognition Complex (ORC), Cdc6, and Cdt1 co-assemble to load the Mcm2-7 replicative helicase onto chromatin. Current replication models envisage a linear arrangement of isolated origins functioning autonomously; the extent of inter-origin organization and communication is unknown. Here, we report that the replication initiation machinery of D. melanogaster unexpectedly undergoes liquid-liquid phase separation (LLPS) upon binding DNA in vitro. We find that ORC, Cdc6, and Cdt1 contain intrinsically disordered regions (IDRs) that drive LLPS and constitute a new class of phase separating elements. Initiator IDRs are shown to regulate multiple functions, including chromosome recruitment, initiator-specific co-assembly, and Mcm2-7 loading. These data help explain how CDK activity controls replication initiation and suggest that replication programs are subject to higher-order levels of inter-origin organization.

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