G3: Genes, Genomes, Genetics (Dec 2021)
Assembled and annotated 26.5 Gbp coast redwood genome: a resource for estimating evolutionary adaptive potential and investigating hexaploid origin
- David B Neale,
- Aleksey V Zimin,
- Sumaira Zaman,
- Alison D Scott,
- Bikash Shrestha,
- Rachael E Workman,
- Daniela Puiu,
- Brian J Allen,
- Zane J Moore,
- Manoj K Sekhwal,
- Amanda R De La Torre,
- Patrick E McGuire,
- Emily Burns,
- Winston Timp,
- Jill L Wegrzyn,
- Steven L Salzberg
Affiliations
- David B Neale
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Aleksey V Zimin
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- Sumaira Zaman
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, USA
- Alison D Scott
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Bikash Shrestha
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, USA
- Rachael E Workman
- Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, MD 21205, USA
- Daniela Puiu
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- Brian J Allen
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Zane J Moore
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Manoj K Sekhwal
- School of Forestry, Northern Arizona University, Flagstaff, AZ 86011, USA
- Amanda R De La Torre
- ORCiD
- School of Forestry, Northern Arizona University, Flagstaff, AZ 86011, USA
- Patrick E McGuire
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Emily Burns
- Save the Redwoods League, San Francisco, CA 94104, USA
- Winston Timp
- ORCiD
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- Jill L Wegrzyn
- ORCiD
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, USA
- Steven L Salzberg
- ORCiD
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- DOI
- https://doi.org/10.1093/g3journal/jkab380
- Journal volume & issue
-
Vol. 12,
no. 1
Abstract
AbstractSequencing, assembly, and annotation of the 26.5 Gbp hexaploid genome of coast redwood (Sequoia sempervirens
