Scientific Reports (Feb 2024)

Proof of concept for quantitative adverse outcome pathway modeling of chronic toxicity in repeated exposure

  • Shigeaki Ito,
  • Sayak Mukherjee,
  • Kazuo Erami,
  • Shugo Muratani,
  • Akina Mori,
  • Sakuya Ichikawa,
  • William White,
  • Kei Yoshino,
  • Dawn Fallacara

DOI
https://doi.org/10.1038/s41598-024-55220-4
Journal volume & issue
Vol. 14, no. 1
pp. 1 – 15

Abstract

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Abstract Adverse Outcome Pathway (AOP) is a useful tool to glean mode of action (MOE) of a chemical. However, in order to use it for the purpose of risk assessment, an AOP needs to be quantified using in vitro or in vivo data. Majority of quantitative AOPs developed so far, were for single exposure to progressively higher doses. Limited attempts were made to include time in the modeling. Here as a proof-of concept, we developed a hypothetical AOP, and quantified it using a virtual dataset for six repeated exposures using a Bayesian Network Analysis (BN) framework. The virtual data was generated using realistic assumptions. Effects of each exposure were analyzed separately using a static BN model and analyzed in combination using a dynamic BN (DBN) model. Our work shows that the DBN model can be used to calculate the probability of adverse outcome when other upstream KEs were observed earlier. These probabilities can help in identification of early indicators of AO. In addition, we also developed a data driven AOP pruning technique using a lasso-based subset selection, and show that the causal structure of AOP is itself dynamic and changes over time. This proof-of-concept study revealed the possibility for expanding the applicability of the AOP framework to incorporate biological dynamism in toxicity appearance by repeated insults.