Nature Communications (Aug 2017)

Annotating pathogenic non-coding variants in genic regions

  • Sahar Gelfman,
  • Quanli Wang,
  • K. Melodi McSweeney,
  • Zhong Ren,
  • Francesca La Carpia,
  • Matt Halvorsen,
  • Kelly Schoch,
  • Fanni Ratzon,
  • Erin L. Heinzen,
  • Michael J. Boland,
  • Slavé Petrovski,
  • David B. Goldstein

DOI
https://doi.org/10.1038/s41467-017-00141-2
Journal volume & issue
Vol. 8, no. 1
pp. 1 – 11

Abstract

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While non-coding synonymous and intronic variants are often not under strong selective constraint, they can be pathogenic through affecting splicing or transcription. Here, the authors develop a score that uses sequence context alterations to predict pathogenicity of synonymous and non-coding genetic variants, and provide a web server of pre-computed scores.