Modulated differential wavefront sensing (MDWS) is an alignment control scheme in the regime of beams with strong higher order transversal modes (HOMs). It is based on the differential wavefront sensing (DWS) technique. MDWS represents a significant upgrade over conventional techniques used in the presence of high HOM content as it allows for higher control bandwidths while eliminating the need of auxiliary alignment modulations, that otherwise cause loss of applied squeezing. The output port of gravitational wave (GW) interferometers (IFO) is one such place where a lot of HOMs are present. These are filtered out by a cavity called the output mode cleaner (OMC), whose alignment gets challenging due to the presence of HOMs. In this paper, we present the first demonstration of the MDWS scheme for aligning the fundamental mode from the IFO to the OMC at the gravitational wave detector-GEO 600.