Nature Communications (Jan 2019)
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity
- Longqi Liu,
- Chuanyu Liu,
- Andrés Quintero,
- Liang Wu,
- Yue Yuan,
- Mingyue Wang,
- Mengnan Cheng,
- Lizhi Leng,
- Liqin Xu,
- Guoyi Dong,
- Rui Li,
- Yang Liu,
- Xiaoyu Wei,
- Jiangshan Xu,
- Xiaowei Chen,
- Haorong Lu,
- Dongsheng Chen,
- Quanlei Wang,
- Qing Zhou,
- Xinxin Lin,
- Guibo Li,
- Shiping Liu,
- Qi Wang,
- Hongru Wang,
- J. Lynn Fink,
- Zhengliang Gao,
- Xin Liu,
- Yong Hou,
- Shida Zhu,
- Huanming Yang,
- Yunming Ye,
- Ge Lin,
- Fang Chen,
- Carl Herrmann,
- Roland Eils,
- Zhouchun Shang,
- Xun Xu
Affiliations
- Longqi Liu
- BGI-Shenzhen
- Chuanyu Liu
- BGI-Shenzhen
- Andrés Quintero
- Division of Theoretical Bioinformatics, German Cancer Research Center (DKFZ)
- Liang Wu
- BGI-Shenzhen
- Yue Yuan
- BGI-Shenzhen
- Mingyue Wang
- BGI-Shenzhen
- Mengnan Cheng
- BGI-Shenzhen
- Lizhi Leng
- Institute of Reproductive & Stem Cell Engineering, Central South University
- Liqin Xu
- BGI-Shenzhen
- Guoyi Dong
- BGI-Shenzhen
- Rui Li
- BGI-Shenzhen
- Yang Liu
- BGI-Shenzhen
- Xiaoyu Wei
- BGI-Shenzhen
- Jiangshan Xu
- BGI-Shenzhen
- Xiaowei Chen
- China National GeneBank, BGI-Shenzhen
- Haorong Lu
- China National GeneBank, BGI-Shenzhen
- Dongsheng Chen
- BGI-Shenzhen
- Quanlei Wang
- BGI-Shenzhen
- Qing Zhou
- BGI-Shenzhen
- Xinxin Lin
- BGI-Shenzhen
- Guibo Li
- BGI-Shenzhen
- Shiping Liu
- BGI-Shenzhen
- Qi Wang
- Division of Theoretical Bioinformatics, German Cancer Research Center (DKFZ)
- Hongru Wang
- Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences
- J. Lynn Fink
- BGI-Shenzhen
- Zhengliang Gao
- Department of Regenerative Medicine, Tongji University School of Medicine
- Xin Liu
- BGI-Shenzhen
- Yong Hou
- BGI-Shenzhen
- Shida Zhu
- BGI-Shenzhen
- Huanming Yang
- BGI-Shenzhen
- Yunming Ye
- Harbin Institute of Technology Shenzhen Graduate School, Xili University Town
- Ge Lin
- Institute of Reproductive & Stem Cell Engineering, Central South University
- Fang Chen
- BGI-Shenzhen
- Carl Herrmann
- Division of Theoretical Bioinformatics, German Cancer Research Center (DKFZ)
- Roland Eils
- Health Data Science Unit, Heidelberg University Hospital
- Zhouchun Shang
- BGI-Shenzhen
- Xun Xu
- BGI-Shenzhen
- DOI
- https://doi.org/10.1038/s41467-018-08205-7
- Journal volume & issue
-
Vol. 10,
no. 1
pp. 1 – 10
Abstract
Heterogeneity in gene expression and epigenetic states exists across individual cells. Here, the authors develop scCAT-seq, a technique for simultaneously performing ATAC-seq and RNA-seq within the same single cell.