Scientific Reports (May 2023)

Succinylation-associated lncRNA signature to predict the prognosis of colon cancer based on integrative bioinformatics analysis

  • Si-ming Zhang,
  • Cheng Shen,
  • Jue Gu,
  • Jing Li,
  • Xiaohui Jiang,
  • Zhijun Wu,
  • Aiguo Shen

DOI
https://doi.org/10.1038/s41598-023-34503-2
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 13

Abstract

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Abstract Colon cancer (CC) has a poor 5-year survival rate though the treatment techniques and strategies have been improved. Succinylation and long noncoding RNAs (lncRNAs) have prognostic value for CC patients. We analyzed and obtained succinylation-related lncRNA by co-expression in CC. A novel succinylation-related lncRNA model was developed by univariate and Least absolute shrinkage and selection operator (Lasso) regression analysis and we used principal component analysis (PCA), functional enrichment annotation, tumor immune environment, drug sensitivity and nomogram to verify the model, respectively. Six succinylation-related lncRNAs in our model were finally confirmed to distinguish the survival status of CC and showed statistically significant differences in training set, testing set, and entire set. The prognosis of with this model was associated with age, gender, M0 stage, N2 stage, T3 + T4 stage and Stage III + IV. The high-risk group showed a higher mutation rate than the low-risk group. We constructed a model to predict overall survival for 1-, 3-, and 5-year with AUCs of 0.694, 0.729, and 0.802, respectively. The high-risk group was sensitive to Cisplatin and Temozolomide compounds. Our study provided novel insights into the value of the succinylation-related lncRNA signature as a predictor of prognosis, which had high clinical application value in the future.