PLoS ONE (Jan 2019)

ETDB-Caltech: A blockchain-based distributed public database for electron tomography.

  • Davi R Ortega,
  • Catherine M Oikonomou,
  • H Jane Ding,
  • Prudence Rees-Lee,
  • Alexandria,
  • Grant J Jensen

DOI
https://doi.org/10.1371/journal.pone.0215531
Journal volume & issue
Vol. 14, no. 4
p. e0215531

Abstract

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Three-dimensional electron microscopy techniques like electron tomography provide valuable insights into cellular structures, and present significant challenges for data storage and dissemination. Here we explored a novel method to publicly release more than 11,000 such datasets, more than 30 TB in total, collected by our group. Our method, based on a peer-to-peer file sharing network built around a blockchain ledger, offers a distributed solution to data storage. In addition, we offer a user-friendly browser-based interface, https://etdb.caltech.edu, for anyone interested to explore and download our data. We discuss the relative advantages and disadvantages of this system and provide tools for other groups to mine our data and/or use the same approach to share their own imaging datasets.