Biophysica (May 2024)

Enhanced Adsorption of Cage-Shaped Proteins on Carbon Surfaces by Carbon Nanotube (CNT)-Binding Peptide Aptamers

  • Narangerel Ganbaatar,
  • Ting-Chieh Chu,
  • Naofumi Okamoto,
  • Kenji Iwahori,
  • Masakazu Nakamura,
  • Ichiro Yamashita

DOI
https://doi.org/10.3390/biophysica4020018
Journal volume & issue
Vol. 4, no. 2
pp. 256 – 266

Abstract

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The adsorption behavior of recombinant cage-shaped proteins with carbon nanotube (CNT)-binding peptides on carbon surfaces was quantitatively and dynamically analyzed using a highly stable quartz crystal microbalance (QCM). Two types of CNT-binding peptide aptamers obtained by the phage display method were attached to the N- and C-termini of the Dps (DNA-binding protein derived from starved cells) to produce carbonaceous material-binding Dps. The carbon adsorption ability of the mutant Dps was studied by QCM measurement using a carbon-coated QCM sensor. The produced peptide aptamer-modified Dps showed higher affinity than a wild Dps and also showed higher adsorption capacity than a previously used Dps with carbon nanohorn-binding peptides. The newly obtained peptide aptamers were proven to provide Dps with high adsorption affinity on carbon surfaces. Furthermore, the aptamer modified to the N-terminus of the Dps subunit showed more efficient adsorption than the aptamers attached to the C-terminus of the Dp, and the linker was found to improve the adsorption ability.

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