Frontiers in Aging Neuroscience (Jul 2023)

The prediction of Alzheimer’s disease through multi-trait genetic modeling

  • Kaylyn Clark,
  • Kaylyn Clark,
  • Wei Fu,
  • Chia-Lun Liu,
  • Chia-Lun Liu,
  • Pei-Chuan Ho,
  • Pei-Chuan Ho,
  • Pei-Chuan Ho,
  • Hui Wang,
  • Hui Wang,
  • Wan-Ping Lee,
  • Wan-Ping Lee,
  • Shin-Yi Chou,
  • Shin-Yi Chou,
  • Shin-Yi Chou,
  • Shin-Yi Chou,
  • Li-San Wang,
  • Li-San Wang,
  • Jung-Ying Tzeng,
  • Jung-Ying Tzeng,
  • Jung-Ying Tzeng

DOI
https://doi.org/10.3389/fnagi.2023.1168638
Journal volume & issue
Vol. 15

Abstract

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To better capture the polygenic architecture of Alzheimer’s disease (AD), we developed a joint genetic score, MetaGRS. We incorporated genetic variants for AD and 24 other traits from two independent cohorts, NACC (n = 3,174, training set) and UPitt (n = 2,053, validation set). One standard deviation increase in the MetaGRS is associated with about 57% increase in the AD risk [hazard ratio (HR) = 1.577, p = 7.17 E-56], showing little difference from the HR for AD GRS alone (HR = 1.579, p = 1.20E-56), suggesting similar utility of both models. We also conducted APOE-stratified analyses to assess the role of the e4 allele on risk prediction. Similar to that of the combined model, our stratified results did not show a considerable improvement of the MetaGRS. Our study showed that the prediction power of the MetaGRS significantly outperformed that of the reference model without any genetic information, but was effectively equivalent to the prediction power of the AD GRS.

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