Biosensors
(Nov 2022)
Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
Artem Tabarov,
Vladimir Vitkin,
Olga Andreeva,
Arina Shemanaeva,
Evgeniy Popov,
Alexander Dobroslavin,
Valeria Kurikova,
Olga Kuznetsova,
Konstantin Grigorenko,
Ivan Tzibizov,
Anton Kovalev,
Vitaliy Savchenko,
Alyona Zheltuhina,
Andrey Gorshkov,
Daria Danilenko
Affiliations
Artem Tabarov
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Vladimir Vitkin
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Olga Andreeva
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Arina Shemanaeva
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Evgeniy Popov
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Alexander Dobroslavin
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Valeria Kurikova
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Olga Kuznetsova
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Konstantin Grigorenko
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Ivan Tzibizov
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Anton Kovalev
Institute of Advanced Data Transfer Systems, ITMO University, Birzhevaya Liniya 14, 199034 Saint Petersburg, Russia
Vitaliy Savchenko
National Research Center “Kurchatov Institute”, Akademika Kurchatova Sq. 1, 123182 Moscow, Russia
Alyona Zheltuhina
Smorodintsev Research Institute of Influenza, Prof. Popova Str. 15/17, 197376 Saint Petersburg, Russia
Andrey Gorshkov
Smorodintsev Research Institute of Influenza, Prof. Popova Str. 15/17, 197376 Saint Petersburg, Russia
Daria Danilenko
Smorodintsev Research Institute of Influenza, Prof. Popova Str. 15/17, 197376 Saint Petersburg, Russia
DOI
https://doi.org/10.3390/bios12121065
Journal volume & issue
Vol. 12,
no. 12
p.
1065
Abstract
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We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for their straight classification and detection. Machine learning technologies (particularly, the support vector machine method) enabled the differentiation of samples containing influenza A and B viruses using SERS with an accuracy of 93% at a concentration of 200 μg/mL. The minimum detectable concentration of the virus in the sample using the proposed approach was ~0.05 μg/mL of protein (according to the Lowry protein assay), and the detection accuracy of a sample with this pathogen concentration was 84%.
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