Synthesis and Characterization of Click Chemical Probes for Single-Cell Resolution Detection of Epichaperomes in Neurodegenerative Disorders
Sadik Bay,
Chander S. Digwal,
Ananda M. Rodilla Martín,
Sahil Sharma,
Aleksandra Stanisavljevic,
Anna Rodina,
Anoosha Attaran,
Tanaya Roychowdhury,
Kamya Parikh,
Eugene Toth,
Palak Panchal,
Eric Rosiek,
Chiranjeevi Pasala,
Ottavio Arancio,
Paul E. Fraser,
Melissa J. Alldred,
Marco A. M. Prado,
Stephen D. Ginsberg,
Gabriela Chiosis
Affiliations
Sadik Bay
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Chander S. Digwal
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Ananda M. Rodilla Martín
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Sahil Sharma
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Aleksandra Stanisavljevic
Center for Dementia Research, Nathan Kline Institute, Orangeburg, NY 10962, USA
Anna Rodina
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Anoosha Attaran
Department of Physiology and Pharmacology, Schulich School of Medicine, Robarts Research Institute, The University of Western Ontario, London, ON N6A 3K7, Canada
Tanaya Roychowdhury
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Kamya Parikh
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Eugene Toth
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Palak Panchal
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Eric Rosiek
Molecular Cytology Core, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Chiranjeevi Pasala
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Ottavio Arancio
Taub Institute for Research on Alzheimer’s Disease and the Aging Brain, New York, NY 10032, USA
Paul E. Fraser
Tanz Centre for Research in Neurodegenerative Diseases and Department of Medical Biophysics, University of Toronto, Toronto, ON M5R 0A3, Canada
Melissa J. Alldred
Center for Dementia Research, Nathan Kline Institute, Orangeburg, NY 10962, USA
Marco A. M. Prado
Department of Physiology and Pharmacology, Schulich School of Medicine, Robarts Research Institute, The University of Western Ontario, London, ON N6A 3K7, Canada
Stephen D. Ginsberg
Center for Dementia Research, Nathan Kline Institute, Orangeburg, NY 10962, USA
Gabriela Chiosis
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Neurodegenerative disorders, including Alzheimer’s disease (AD) and Parkinson’s disease (PD), represent debilitating conditions with complex, poorly understood pathologies. Epichaperomes, pathologic protein assemblies nucleated on key chaperones, have emerged as critical players in the molecular dysfunction underlying these disorders. In this study, we introduce the synthesis and characterization of clickable epichaperome probes, PU-TCO, positive control, and PU-NTCO, negative control. Through comprehensive in vitro assays and cell-based investigations, we establish the specificity of the PU-TCO probe for epichaperomes. Furthermore, we demonstrate the efficacy of PU-TCO in detecting epichaperomes in brain tissue with a cellular resolution, underscoring its potential as a valuable tool for dissecting single-cell responses in neurodegenerative diseases. This clickable probe is therefore poised to address a critical need in the field, offering unprecedented precision and versatility in studying epichaperomes and opening avenues for novel insights into their role in disease pathology.