Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound
Sook-Young Park,
Jongbum Jeon,
Jung A Kim,
Mi Jin Jeon,
Nan Hee Yu,
Seulbi Kim,
Ae Ran Park,
Jin-Cheol Kim,
Yerim Lee,
Youngmin Kim,
Eu Ddeum Choi,
Min-Hye Jeong,
Yong-Hwan Lee,
Soonok Kim
Affiliations
Sook-Young Park
Department of Plant Medicine, Sunchon National University
Jongbum Jeon
Department of Agricultural Biotechnology, Interdisciplinary Program in Agricultural Genomics, Center for Fungal Genetic Resources, and Center for Fungal Pathogenesis, Seoul National University
Jung A Kim
Animal Resources Division, National Institute of Biological Resources
Mi Jin Jeon
Microorganism Resources Division, National Institute of Biological Resources
Nan Hee Yu
Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, Chonnam National University
Seulbi Kim
Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, Chonnam National University
Ae Ran Park
Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, Chonnam National University
Jin-Cheol Kim
Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, Chonnam National University
Yerim Lee
Department of Plant Medicine, Sunchon National University
Youngmin Kim
Department of Plant Medicine, Sunchon National University
Eu Ddeum Choi
Department of Plant Medicine, Sunchon National University
Min-Hye Jeong
Department of Plant Medicine, Sunchon National University
Yong-Hwan Lee
Department of Agricultural Biotechnology, Interdisciplinary Program in Agricultural Genomics, Center for Fungal Genetic Resources, and Center for Fungal Pathogenesis, Seoul National University
Soonok Kim
Microorganism Resources Division, National Institute of Biological Resources
An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.
