Open Research Europe (May 2022)
FAIR4Health: Findable, Accessible, Interoperable and Reusable data to foster Health Research [version 2; peer review: 1 approved, 2 approved with reservations]
- Christian Lovis,
- Christophe Gaudet-Blavignac,
- Miriam Quintero,
- Patrick Weber,
- Kevin Ashley,
- Manuel M. Perez-Perez,
- Carlos Luis Parra Calderón,
- Laurence Horton,
- Celia Alvarez-Romero,
- A. Anil Sinaci,
- Alicia Martínez-García,
- Eva Méndez,
- Mert Gencturk,
- Rosa Liperoti,
- Tony Hernández-Pérez,
- Matthias Löbe,
- Carmen Angioletti,
- Thomas M. Deserno,
- Nagarajan Ganapathy,
- Elisio Costa,
- Marta Almada,
- Giorgio Cangioli,
- Catherine Chronaki,
- Beatriz Poblador-Plou,
- Ronald Cornet,
- Antonio Gimeno-Miguel,
- Jonás Carmona-Pírez,
- Alexandra Prados-Torres,
- Antonio Poncel-Falcó,
- Bojan Zaric,
- Tomi Kovacevic,
- Sanja Hromis,
- Darijo Bokan,
- Carlos Rapallo Fernández,
- Jelena Djekic Malbasa,
- Jessica Rochat,
- Teresa Velázquez Fernández
Affiliations
- Christian Lovis
- ORCiD
- University of Geneva and University hospitals of Geneva, Geneva, 1211, Switzerland
- Christophe Gaudet-Blavignac
- ORCiD
- University of Geneva and University hospitals of Geneva, Geneva, 1211, Switzerland
- Miriam Quintero
- Atos Research and Innovation - ARI. Atos IT., Madrid, 28037, Spain
- Patrick Weber
- Nice Computing SA Le Mont-sur-Lausanne, Le Mont-sur-Lausanne, 1052, Switzerland
- Kevin Ashley
- ORCiD
- Digital Curation Centre, University of Edinburgh, Argyle House, Edinburgh, EH3 9DR, UK
- Manuel M. Perez-Perez
- Atos Research and Innovation - ARI. Atos IT., Madrid, 28037, Spain
- Carlos Luis Parra Calderón
- ORCiD
- Computational Health Informatics Group, Institute of Biomedicine of Seville, IBiS / Virgen del Rocío University Hospital / CSIC / University of Seville, Seville, 41013, Spain
- Laurence Horton
- ORCiD
- Digital Curation Centre, University of Glasgow, Glasgow, G12 8QQ, UK
- Celia Alvarez-Romero
- ORCiD
- Computational Health Informatics Group, Institute of Biomedicine of Seville, IBiS / Virgen del Rocío University Hospital / CSIC / University of Seville, Seville, 41013, Spain
- A. Anil Sinaci
- ORCiD
- SRDC Software Research Development and Consultancy Corporation, Ankara, 06800, Turkey
- Alicia Martínez-García
- Computational Health Informatics Group, Institute of Biomedicine of Seville, IBiS / Virgen del Rocío University Hospital / CSIC / University of Seville, Seville, 41013, Spain
- Eva Méndez
- ORCiD
- Dept. of Library & Inf Sci. Universidad Carlos III de Madrid, Getafe, 28903, Spain
- Mert Gencturk
- ORCiD
- SRDC Software Research Development and Consultancy Corporation, Ankara, 06800, Turkey
- Rosa Liperoti
- Department of Geriatric and Orthopedic Sciences, Catholic University of Sacred Heart, Roma, 00168, Italy
- Tony Hernández-Pérez
- ORCiD
- Dept. of Library & Inf Sci. Universidad Carlos III de Madrid, Getafe, 28903, Spain
- Matthias Löbe
- ORCiD
- Institute for Medical Informatics (IMISE), University of Leipzig, Leipzig, 04107, Germany
- Carmen Angioletti
- ORCiD
- Department of Geriatric and Orthopedic Sciences, Catholic University of Sacred Heart, Roma, 00168, Italy
- Thomas M. Deserno
- PLRI Institute for Medical Informatics of TU Braunschweig and Hannover Medical School, Braunschweig, 38106, Germany
- Nagarajan Ganapathy
- ORCiD
- PLRI Institute for Medical Informatics of TU Braunschweig and Hannover Medical School, Braunschweig, 38106, Germany
- Elisio Costa
- ORCiD
- Ucibio Requimte, Faculty of Pharmacy University of Porto. Porto4Ageing, Porto, 4050-313, Portugal
- Marta Almada
- ORCiD
- Ucibio Requimte, Faculty of Pharmacy University of Porto. Porto4Ageing, Porto, 4050-313, Portugal
- Giorgio Cangioli
- HL7 Europe Foundation, Brussels, 1000, Belgium
- Catherine Chronaki
- ORCiD
- HL7 Europe Foundation, Brussels, 1000, Belgium
- Beatriz Poblador-Plou
- ORCiD
- EpiChron Research Group, Aragon Health Sciences Institute (IACS), IIS Aragón, Miguel Servet University Hospital, Zaragoza, 50009, Spain
- Ronald Cornet
- ORCiD
- Amsterdam UMC, University of Amsterdam, Medical Informatics, Amsterdam Public Health, Amsterdam, 1105AZ, The Netherlands
- Antonio Gimeno-Miguel
- EpiChron Research Group, Aragon Health Sciences Institute (IACS), IIS Aragón, Miguel Servet University Hospital, Zaragoza, 50009, Spain
- Jonás Carmona-Pírez
- ORCiD
- EpiChron Research Group, Aragon Health Sciences Institute (IACS), IIS Aragón, Miguel Servet University Hospital, Zaragoza, 50009, Spain
- Alexandra Prados-Torres
- EpiChron Research Group, Aragon Health Sciences Institute (IACS), IIS Aragón, Miguel Servet University Hospital, Zaragoza, 50009, Spain
- Antonio Poncel-Falcó
- EpiChron Research Group, Aragon Health Sciences Institute (IACS), IIS Aragón, Aragon Health Service, Zaragoza, 50009, Spain
- Bojan Zaric
- ORCiD
- Medical Faculty University of Novi Sad, Novi Sad, 21000, Serbia
- Tomi Kovacevic
- Medical Faculty University of Novi Sad, Novi Sad, 21000, Serbia
- Sanja Hromis
- Medical Faculty University of Novi Sad, Novi Sad, 21000, Serbia
- Darijo Bokan
- Institute for Pulmonary Diseases of Vojvodina, Sremska Kamenica, 21204, Serbia
- Carlos Rapallo Fernández
- J&A Garrigues, S.L.P., Seville, 41013, Spain
- Jelena Djekic Malbasa
- Medical Faculty University of Novi Sad, Novi Sad, 21000, Serbia
- Jessica Rochat
- University of Geneva and University hospitals of Geneva, Geneva, 1211, Switzerland
- Teresa Velázquez Fernández
- J&A Garrigues, S.L.P., Seville, 41013, Spain
- Journal volume & issue
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Vol. 2
Abstract
Due to the nature of health data, its sharing and reuse for research are limited by ethical, legal and technical barriers. The FAIR4Health project facilitated and promoted the application of FAIR principles in health research data, derived from the publicly funded health research initiatives to make them Findable, Accessible, Interoperable, and Reusable (FAIR). To confirm the feasibility of the FAIR4Health solution, we performed two pathfinder case studies to carry out federated machine learning algorithms on FAIRified datasets from five health research organizations. The case studies demonstrated the potential impact of the developed FAIR4Health solution on health outcomes and social care research. Finally, we promoted the FAIRified data to share and reuse in the European Union Health Research community, defining an effective EU-wide strategy for the use of FAIR principles in health research and preparing the ground for a roadmap for health research institutions. This scientific report presents a general overview of the FAIR4Health solution: from the FAIRification workflow design to translate raw data/metadata to FAIR data/metadata in the health research domain to the FAIR4Health demonstrators’ performance.