Data of RNA-seq transcriptomes of liver, bone, heart, kidney and blood in klotho mice at a pre-symptomatic state and the effect of a traditional Japanese multi-herbal medicine, juzentaihoto
Norihiro Okada,
Kenshiro Oshima,
Yuki Iwasaki,
Akiko Maruko,
Kenya Matsumura,
Erica Iioka,
Trieu-Duc Vu,
Naoki Fujitsuka,
Akinori Nishi,
Aiko Sugiyama,
Mitsue Nishiyama,
Atsushi Kaneko,
Kazushige Mizoguchi,
Masahiro Yamamoto,
Susumu Nishimura
Affiliations
Norihiro Okada
School of Pharmacy, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa 252- 0373 Japan; Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan; Nagahama Institute of Bio-Science and Technology, Nagahama, Japan; Corresponding author.
Kenshiro Oshima
School of Pharmacy, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa 252- 0373 Japan; Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan
Yuki Iwasaki
Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan; Nagahama Institute of Bio-Science and Technology, Nagahama, Japan
Akiko Maruko
School of Pharmacy, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa 252- 0373 Japan; Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan
Kenya Matsumura
School of Pharmacy, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa 252- 0373 Japan
Erica Iioka
Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan
Trieu-Duc Vu
School of Pharmacy, Kitasato University, 1-15-1 Kitasato, Minami, Sagamihara, Kanagawa 252- 0373 Japan; Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan
Naoki Fujitsuka
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Akinori Nishi
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Aiko Sugiyama
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Mitsue Nishiyama
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Atsushi Kaneko
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Kazushige Mizoguchi
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Masahiro Yamamoto
Tsumura Kampo Research Laboratories, Tsumura & CO., 3586 Yoshiwara, Ami-machi, Ibaraki 300- 1192 Japan
Susumu Nishimura
Foundation for Advancement of International Science (FAIS) , 3-24-16 Kasuga, Tsukuba, Ibaraki 305-0821 Japan; Laboratory Animal Resource Center, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305- 8575 Japan
We performed RNA-seq analyses of mRNA isolated from five organs, liver, bone, heart, kidney and blood at the pre-symptomatic state of klotho mice with/without administration of a Japanese traditional herbal medicine, juzentaihoto (JTT). Data of differentially expressed genes (DEG) with/without JTT was included. Intron retention (IR) is an important regulatory mechanism that affects gene expression and protein functions. We collected data in which retained-introns were accumulated in a particular set of genes of these organs, and showed that among these retained introns in the liver and bone a subset was recovered to the normal state by the medicine. All of the data present changes of molecular events on the levels of metabolites, proteins and gene expressions observed at the pre- symptomatic state of aging in klotho mice with/without JTT. The research article related to this Data in Brief is published in GENE entitled as “Intron retention as a new pre-symptomatic marker of aging and its recovery to the normal state by a traditional Japanese herbal medicine”.