Data on draft genome sequence of stenotrophomonas sp. SAM-B isolated from a mineral cold spring located in Tyva, southern Siberia
Elena S. Kashkak,
Vladimir Ya Kataev,
Yuri A. Khlopko,
Valentina G. Budagaeva,
Erzhena V. Danilova,
Urana S. Oorzhak,
Olga P. Dagurova,
Andrey O. Plotnikov
Affiliations
Elena S. Kashkak
The Department of Chemistry, Tuvan State University, 36 Lenin St., Kyzyl 667000, Russian Federation
Vladimir Ya Kataev
Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation; Corresponding author.
Yuri A. Khlopko
Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation
Valentina G. Budagaeva
Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation
Erzhena V. Danilova
Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation
Urana S. Oorzhak
The Department of Chemistry, Tuvan State University, 36 Lenin St., Kyzyl 667000, Russian Federation
Olga P. Dagurova
Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation
Andrey O. Plotnikov
Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation
Stenotrophomonas sp. SAM-B was isolated from Uzharlyg Mineral Cold Spring, Samagaltay Settlement, Republic of Tyva (Southern Siberia), Russian Federation. A whole genome sequencing of Stenotrophomonas sp. SAM-B was performed using an Illumina MiSeq platform. The resulting draft genome contains 4,253,956 bp with 66.48% GC-content and 71 contigs; the longest contig contains 968,648 bp, and the N50 has a length of 401,736 bp. The genome includes 3816 protein-coding genes, among which 23 are responsible for protein degradation, 65 are associated with stress response, and 31 are associated with virulence, disease, and defense, including beta-lactamase and resistance to fluoroquinolones. The genome data on the SAM-B strain provides fundamental knowledge that would allow a better understanding of the microorganisms inhabiting cold water environments. Moreover, the results of the genome annotation indicated that diverse metabolic pathways are encoded in the genome of the SAM-B strain and that it has biotechnological potential. The draft genome sequence of Stenotrophomonas sp. SAM-B has been deposited in DDBJ/ENA/GenBank under the accession number JABBXB000000000; the accession number of the genome sequence referred to in this paper is JABBXB010000000.
