PLoS Medicine (Nov 2018)

Deep learning for lung cancer prognostication: A retrospective multi-cohort radiomics study.

  • Ahmed Hosny,
  • Chintan Parmar,
  • Thibaud P Coroller,
  • Patrick Grossmann,
  • Roman Zeleznik,
  • Avnish Kumar,
  • Johan Bussink,
  • Robert J Gillies,
  • Raymond H Mak,
  • Hugo J W L Aerts

DOI
https://doi.org/10.1371/journal.pmed.1002711
Journal volume & issue
Vol. 15, no. 11
p. e1002711

Abstract

Read online

BackgroundNon-small-cell lung cancer (NSCLC) patients often demonstrate varying clinical courses and outcomes, even within the same tumor stage. This study explores deep learning applications in medical imaging allowing for the automated quantification of radiographic characteristics and potentially improving patient stratification.Methods and findingsWe performed an integrative analysis on 7 independent datasets across 5 institutions totaling 1,194 NSCLC patients (age median = 68.3 years [range 32.5-93.3], survival median = 1.7 years [range 0.0-11.7]). Using external validation in computed tomography (CT) data, we identified prognostic signatures using a 3D convolutional neural network (CNN) for patients treated with radiotherapy (n = 771, age median = 68.0 years [range 32.5-93.3], survival median = 1.3 years [range 0.0-11.7]). We then employed a transfer learning approach to achieve the same for surgery patients (n = 391, age median = 69.1 years [range 37.2-88.0], survival median = 3.1 years [range 0.0-8.8]). We found that the CNN predictions were significantly associated with 2-year overall survival from the start of respective treatment for radiotherapy (area under the receiver operating characteristic curve [AUC] = 0.70 [95% CI 0.63-0.78], p ConclusionsOur results provide evidence that deep learning networks may be used for mortality risk stratification based on standard-of-care CT images from NSCLC patients. This evidence motivates future research into better deciphering the clinical and biological basis of deep learning networks as well as validation in prospective data.