Using Domain Adaptation and Inductive Transfer Learning to Improve Patient Outcome Prediction in the Intensive Care Unit: Retrospective Observational Study

Abstract

BackgroundAccurate patient outcome prediction in the intensive care unit (ICU) can potentially lead to more effective and efficient patient care. Deep learning models are capable of learning from data to accurately predict patient outcomes, but they typically require large amounts of data and computational resources. Transfer learning (TL) can help in scenarios where data and computational resources are scarce by leveraging pretrained models. While TL has been widely used in medical imaging and natural language processing, it has been rare in electronic health record (EHR) analysis. Furthermore, domain adaptation (DA) has been the most common TL method in general, whereas inductive transfer learning (ITL) has been rare. To the best of our knowledge, DA and ITL have never been studied in-depth in the context of EHR-based ICU patient outcome prediction. ObjectiveThis study investigated DA, as well as rarely researched ITL, in EHR-based ICU patient outcome prediction under simulated, varying levels of data scarcity. MethodsTwo patient cohorts were used in this study: (1) eCritical, a multicenter ICU data from 55,689 unique admission records from 48,672 unique patients admitted to 15 medical-surgical ICUs in Alberta, Canada, between March 2013 and December 2019, and (2) Medical Information Mart for Intensive Care III, a single-center, publicly available ICU data set from Boston, Massachusetts, acquired between 2001 and 2012 containing 61,532 admission records from 46,476 patients. We compared DA and ITL models with baseline models (without TL) of fully connected neural networks, logistic regression, and lasso regression in the prediction of 30-day mortality, acute kidney injury, ICU length of stay, and hospital length of stay. Random subsets of training data, ranging from 1% to 75%, as well as the full data set, were used to compare the performances of DA and ITL with the baseline models at various levels of data scarcity. ResultsOverall, the ITL models outperformed the baseline models in 55 of 56 comparisons (all P values <.001). The DA models outperformed the baseline models in 45 of 56 comparisons (all P values <.001). ITL resulted in better performance than DA in terms of the number of times and the margin with which it outperformed the baseline models. In 11 of 16 cases (8 of 8 for ITL and 3 of 8 for DA), TL models outperformed baseline models when trained using 1% data subset. ConclusionsTL-based ICU patient outcome prediction models are useful in data-scarce scenarios. The results of this study can be used to estimate ICU outcome prediction performance at different levels of data scarcity, with and without TL. The publicly available pretrained models from this study can serve as building blocks in further research for the development and validation of models in other ICU cohorts and outcomes.