Journal of Integrative Bioinformatics (Jun 2015)

The CellML 1.1 Specification

  • Cuellar Autumn,
  • Hedley Warren,
  • Nelson Melanie,
  • Lloyd Catherine,
  • Halstead Matt,
  • Bullivant David,
  • Nickerson David,
  • Hunter Peter,
  • Nielsen Poul

DOI
https://doi.org/10.1515/jib-2015-259
Journal volume & issue
Vol. 12, no. 2
pp. 4 – 85

Abstract

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This document specifies CellML 1.1, an XML-based language for describing and exchanging models of cellular and subcellular processes. MathML embedded in CellML documents is used to define the underlying mathematics of models. Models consist of a network of re- usable components, each with variables and equations manipulating those variables. Models may import other models to create systems of increasing complexity. Metadata may be embedded in CellML documents using RDF.