Communications Biology (Apr 2021)

Increased expression of peptides from non-coding genes in cancer proteomics datasets suggests potential tumor neoantigens

  • Rong Xiang,
  • Leyao Ma,
  • Mingyu Yang,
  • Zetian Zheng,
  • Xiaofang Chen,
  • Fujian Jia,
  • Fanfan Xie,
  • Yiming Zhou,
  • Fuqiang Li,
  • Kui Wu,
  • Yafeng Zhu

DOI
https://doi.org/10.1038/s42003-021-02007-2
Journal volume & issue
Vol. 4, no. 1
pp. 1 – 12

Abstract

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Rong Xiang et al. analyze the expression of non-coding genes encoded peptides in publicly-available proteomics data from five cancer types and matched controls. They identify peptides from non-coding genes including DGCR9 and RHOXF1P3 that are upregulated in tumors compared to controls, suggesting that non-coding gene-encoded peptides may be a source of neoantigens in some cancers.