BioTechniques
(Jan 2020)
ELIMU-MDx: a web-based, open-source platform for storage, management and analysis of diagnostic qPCR data
Silvan Krähenbühl,
Fabian Studer,
Etienne Guirou,
Anna Deal,
Philipp Mächler,
Salome Hosch,
Maximilian Mpina,
Sarah Mswata,
Claudia Daubenberger,
Tobias Schindler
Affiliations
Silvan Krähenbühl
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Fabian Studer
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Etienne Guirou
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Anna Deal
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Philipp Mächler
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Salome Hosch
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Maximilian Mpina
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Sarah Mswata
4Bagamoyo Research & Training Centre, Ifakara Health Institute, Bagamoyo, United Republic of Tanzania
Claudia Daubenberger
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
Tobias Schindler
1Department of Medical Parasitology & Infection Biology, Swiss Tropical & Public Health Institute, Basel, Switzerland
DOI
https://doi.org/10.2144/btn-2019-0064
Journal volume & issue
Vol. 68,
no. 1
pp.
22
– 27
Abstract
Read online
The Electronic Laboratory Information and Management Utensil for Molecular Diagnostics (ELIMU-MDx) is a user-friendly platform designed and built to accelerate the turnaround time of diagnostic qPCR assays. ELIMU-MDx is compliant with Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) guidelines and has extensive data-import capabilities for all major qPCR instruments by using the RDML data standard. This platform was designed as an open-source software tool and can be accessed through the web browser on all major operating systems.
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