Cell Reports (Apr 2023)

Nuclease activity of Plasmodium falciparum Alba family protein PfAlba3

  • Chinmoy Banerjee,
  • Shiladitya Nag,
  • Manish Goyal,
  • Debanjan Saha,
  • Asim Azhar Siddiqui,
  • Somnath Mazumder,
  • Subhashis Debsharma,
  • Saikat Pramanik,
  • Uday Bandyopadhyay

Journal volume & issue
Vol. 42, no. 4
p. 112292

Abstract

Read online

Summary: Plasmodium falciparum Alba domain-containing protein Alba3 (PfAlba3) is ubiquitously expressed in intra-erythrocytic stages of Plasmodium falciparum, but the function of this protein is not yet established. Here, we report an apurinic/apyrimidinic site-driven intrinsic nuclease activity of PfAlba3 assisted by divalent metal ions. Surface plasmon resonance and atomic force microscopy confirm sequence non-specific DNA binding by PfAlba3. Upon binding, PfAlba3 cleaves double-stranded DNA (dsDNA) hydrolytically. Mutational studies coupled with mass spectrometric analysis indicate that K23 is the essential residue in modulating the binding to DNA through acetylation-deacetylation. We further demonstrate that PfSir2a interacts and deacetylates K23-acetylated PfAlba3 in favoring DNA binding. Hence, K23 serves as a putative molecular switch regulating the nuclease activity of PfAlba3. Thus, the nuclease activity of PfAlba3, along with its apurinic/apyrimidinic (AP) endonuclease feature identified in this study, indicates a role of PfAlba3 in DNA-damage response that may have a far-reaching consequence in Plasmodium pathogenicity.

Keywords