Agricultural waste from the fruit and vegetable industry is used as an alternative source of animal feed, but detailed investigations are required. The aim of this work was to conduct a physico-chemical characterization, through analytical techniques, of fruit and vegetable wastes such as those of golden apples, red apples, carrots, celery, beetroots, and red potato peels. The bioactive compounds in the samples indicated a high carbohydrate content of 50.38 g/100 g in golden apples and 59.38 mg/100 g of organic acids in celery. In addition, the total phenolic content (TPC, mg gallic acid equivalent/g dry weight) varied between 3.72 in celery and 15.51 in beetroots. The antioxidant capacity values were significant. A thermal analysis showed thermal stability and weight loss, underscoring the composition of the solid samples. An infrared spectroscopy (FTIR) analysis showed C-H, O-H, C=O, and N-H functional groups in non-starchy carbohydrates, organic acids, and proteins. Microscopic techniques revealed the microstructure, particle size, and semicrystalline profile of the samples. The ultrastructure (determined via atomic force microscopy (AFM)) of celery consisted of a smooth and uniform surface with a lignin and cellulose texture. These results highlight the importance of fruit and vegetable waste as an alternative source of essential nutrients and bioactive compounds for animal feed.