Frontiers in Oncology (Aug 2020)

Drug-Tolerant Idling Melanoma Cells Exhibit Theory-Predicted Metabolic Low-Low Phenotype

  • Dongya Jia,
  • B. Bishal Paudel,
  • B. Bishal Paudel,
  • B. Bishal Paudel,
  • Corey E. Hayford,
  • Corey E. Hayford,
  • Corey E. Hayford,
  • Keisha N. Hardeman,
  • Keisha N. Hardeman,
  • Herbert Levine,
  • Herbert Levine,
  • Herbert Levine,
  • José N. Onuchic,
  • José N. Onuchic,
  • José N. Onuchic,
  • José N. Onuchic,
  • Vito Quaranta,
  • Vito Quaranta

DOI
https://doi.org/10.3389/fonc.2020.01426
Journal volume & issue
Vol. 10

Abstract

Read online

Cancer cells adjust their metabolic profiles to evade treatment. Metabolic adaptation is complex and hence better understood by an integrated theoretical-experimental approach. Using a minimal kinetic model, we predicted a previously undescribed Low/Low (L/L) phenotype, characterized by low oxidative phosphorylation (OXPHOS) and low glycolysis. Here, we report that L/L metabolism is observed in BRAF-mutated melanoma cells that enter a drug-tolerant “idling state” upon long-term MAPK inhibition (MAPKi). Consistently, using publicly available RNA-sequencing data of both cell lines and patient samples, we show that melanoma cells decrease their glycolysis and/or OXPHOS activity upon MAPKi and converge toward the L/L phenotype. L/L metabolism is unfavorable for tumor growth, yet supports successful cell division at ~50% rate. Thus, L/L drug-tolerant idling cells are a reservoir for accumulating mutations responsible for relapse, and it should be considered as a target subpopulation for improving MAPKi outcomes in melanoma treatment.

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