Agronomy (Jul 2021)

Genetic Dissection of Phosphorous Uptake and Utilization Efficiency Traits Using GWAS in Mungbean

  • Venkata Ravi Prakash Reddy,
  • Shouvik Das,
  • Harsh Kumar Dikshit,
  • Gyan Prakash Mishra,
  • Muraleedhar S. Aski,
  • Akanksha Singh,
  • Kuldeep Tripathi,
  • Renu Pandey,
  • Ruchi Bansal,
  • Madan Pal Singh,
  • Padmavati Ganpat Gore,
  • Manjunatha P. B.,
  • Deepali Kothari,
  • Neha Rai,
  • RamaKrishnan M. Nair

DOI
https://doi.org/10.3390/agronomy11071401
Journal volume & issue
Vol. 11, no. 7
p. 1401

Abstract

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Mungbean (Vignaradiata L. Wilczek) is an early maturing legume grown predominantly in Asia for its protein-rich seeds. P deficiency can lead to several physiological disorders which ultimately result in a low grain yield in mungbean. The genetic dissection of PUpE (Puptake efficiency) and PUtE (P utilization efficiency) traits are essential for breeding mungbean varieties with a high P uptake and utilization efficiency. The study involves an association mapping panel consisting of 120 mungbean genotypes which were phenotyped for total dry weight, P concentration, total P uptake, and P utilization efficiency under low P (LP) and normal P (NP) conditions in a hydroponic system. A genotyping-by-sequencing (GBS) based genome-wide association study (GWAS) approach was employed to dissect the complexity of PUpE and PUtE traits at the genetic level in mungbean. This has identified 116 SNPs in 61 protein-coding genes and of these, 16 have been found to enhance phosphorous uptake and utilization efficiency in mungbeans. We identified six genes with a high expression (VRADI01G04370, VRADI05G20860, VRADI06G12490, VRADI08G20910, VRADI08G00070 and VRADI09G09030) in root, shoot apical meristem and leaf, indicating their role in the regulation of P uptake and utilization efficiency in mungbean. The SNPs present in three genes have also been validated using a Sanger sequencing approach.

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