The main contribution of this paper is the development of H∞ fault tolerant control for a wind energy conversion system (WECS) based on the stochastic piecewise affine (PWA) model. In this paper the normal and fault stochastic PWA models for WECS including multiple working points at different wind speeds are established. A reliable piecewise linear quadratic regulator state feedback is designed for the fault tolerant actuator and sensor. A sufficient condition for the existence of the passive fault tolerant controller is derived based on some linear matrix inequalities (LMIs). It is shown that the H∞ fault tolerant controller of WECS can control the wind turbine exposed to multiple simultaneous sensor faults or actuator faults; that is, the reliability of wind turbines can be improved.